CX294038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 6.691e-13 Identity = 34/65 (52.31%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV G + S+ I GS T W M RNWG NW S SYL GQ LSF+VT DG+T+ N+VP+ W Sbjct: 201 NVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 265
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.491e-12 Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV G+G + SV +KG T +SRNWG NWQS++ L GQ+L+F VT++ G+T+ N+VPA W Sbjct: 183 NVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQTLTFGVTSTGGQTLVFQNIVPAWW 246
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.947e-12 Identity = 33/65 (50.77%), Postives = 48/65 (73.85%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGR-TVTSNNVVPANW 216 NVGG GD+ ++++KGS+TGW MS NWG ++Q+ S L GQSLSF++T+ R T+ + N PA+W Sbjct: 180 NVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASW 244
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.542e-12 Identity = 32/65 (49.23%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV AG + S+ + GS T W M+RNWG W S +YL GQ LSF+VT +D +T+ NVVP W Sbjct: 190 NVAAAGSIKSMEVMGSNTADWMPMARNWGAQWHSLAYLTGQGLSFRVTNTDDQTLVFTNVVPPGW 254
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAG V ++ IKG++T W AM +NWGQ W + L GQ LSF++T SDG +V P +W Sbjct: 236 NVGGAGAVRAMQIKGTRTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFIDVTPPDW 299
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 4.337e-12 Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NV G + S+ + GS T W M RNWG NW S SYL GQ LSF+VT DG+T+ N+VP+ W Sbjct: 203 NVATTGLIKSMDVMGSNSTDWLPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGW 267
BLAST of CX294038 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11 Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1 Query: 25 NVGGAGDVHSVSIKGSK-TGWQAMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSNNVVPANW 216 NVGGAGDV +++KG+K W + R+WGQ W++ + L G+SL+F+V D R TS V P +W Sbjct: 214 NVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDW 278 The following BLAST results are available for this feature:
BLAST of CX294038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294038 ID=CX294038; Name=CX294038; organism=Citrus clementina; type=EST; length=530bpback to top |