CX294052
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.558e-21 Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEATT 189 KFPGRQKIIVSRKWGFTKF+RA+Y + ++ RIVPDGVNAK L HGPLA RQPG AF+ AT+ Sbjct: 158 KFPGRQKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGVNAKFLSNHGPLANRQPGSAFISATS 220
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.681e-19 Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 186 KFPGRQKII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG HG LA+R PG+AFL T Sbjct: 158 KFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAET 219
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.681e-19 Identity = 43/62 (69.35%), Postives = 52/62 (83.87%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQRQPGRAFLEAT 186 KFPGRQKII SRKWGFTKF+R +Y++ K+E RI+ DGVNA+LLG HG LA+R PG+AFL T Sbjct: 158 KFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRLAKRAPGKAFLAET 219
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_DICDI (60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=3 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.694e-11 Identity = 28/51 (54.90%), Postives = 39/51 (76.47%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLAQ 153 KFPGRQKI+VS+KWGFT ++R Y + K++ R++ DG N K++ HG LAQ Sbjct: 158 KFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVITNHGTLAQ 208
BLAST of CX294052 vs. ExPASy Swiss-Prot
Match: RL10_DROME (60S ribosomal protein L10 OS=Drosophila melanogaster GN=Qm PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.437e-11 Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 1 KFPGRQKIIVSRKWGFTKFSRADYLRWKSENRIVPDGVNAKLLGCHGPLA 150 KFPGRQKI VS+KWGFTK+ R Y + +NR+ PDG N K HGP+A Sbjct: 158 KFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYRPEHGPIA 207 The following BLAST results are available for this feature:
BLAST of CX294052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294052 ID=CX294052; Name=CX294052; organism=Citrus clementina; type=EST; length=366bpback to top |