CX294065
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLPN (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia pneumoniae GN=ispG PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.124e-25 Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 1 Query: 328 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 +F LQ +R KTEY+SCP CGRTLFDL+E++ IR++T HLPG+ IAIMGCIVNGPGEMADADFG+VG G + Sbjct: 495 AFGTLQNAGVRLVKTEYISCPMCGRTLFDLEEVTTRIRKRTQHLPGLKIAIMGCIVNGPGEMADADFGFVGSKTGMI 571
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTR (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 304 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGRLP-DVGRLCERVCM 594 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLP G+ IA+MGCIVNGPGEMADADFGYVG PG + V C + C+ Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTQHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCI 579
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 304 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGRLP-DVGRLCERVCM 594 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLP G+ IA+MGCIVNGPGEMADADFGYVG PG + V C + C+ Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCI 579
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 304 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGRLP-DVGRLCERVCM 594 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLP G+ IA+MGCIVNGPGEMADADFGYVG PG + V C + C+ Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTQHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCI 579
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLT2 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 56/99 (56.57%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 304 DFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLP-GVSIAIMGCIVNGPGEMADADFGYVGGAPGRLP-DVGRLCERVCM 594 D R F +LQ +R+ EYVSCP CGRTLFDL +S IRE+T HLP G+ IA+MGCIVNGPGEMADADFGYVG PG + V C + C+ Sbjct: 481 DIKLSRTLGFLILQSANIRSVTVEYVSCPGCGRTLFDLLAVSQRIRERTKHLPGGLKIAVMGCIVNGPGEMADADFGYVGSKPGMIDLYVKHKCVKSCI 579
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLFF (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila felis (strain Fe/C-56) GN=ispG PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.045e-24 Identity = 51/90 (56.67%), Postives = 63/90 (70.00%), Query Frame = 1 Query: 289 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 + P +R+ +F LQ +R KTEY+SCP CGRTLFDL E++ IR KT HL G+ IA+MGCIVNGPGEMADADFG+VG G + Sbjct: 481 DLPNIPLPTVREIAFGTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTTRIRNKTKHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTGMI 570
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_PARD8 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=ispG PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.782e-24 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 1 Query: 331 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 F +LQ R R +KTEY+SCPSCGRTL+DLQ A I+E TSHL G+ I IMGCIVNGPGEMADAD+GYVG G++ Sbjct: 502 FGILQATRTRISKTEYISCPSCGRTLYDLQTTIARIKEATSHLKGLKIGIMGCIVNGPGEMADADYGYVGAGRGQI 577
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_PORGI (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Porphyromonas gingivalis GN=ispG PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 1 Query: 328 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRL 558 +F +LQ R+R ++TEY+SCPSCGRTL++LQE A I+ T+HL + I IMGCIVNGPGEMADAD+GYVG PGR+ Sbjct: 470 AFGILQATRLRMSRTEYISCPSCGRTLYNLQETVARIKAATAHLKELKIGIMGCIVNGPGEMADADYGYVGAGPGRI 546
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.327e-24 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 331 FNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPGRLP-DVGRLC 579 FN+LQ R+R +KTE++SCP CGRT F+L++ +A I+++ SHL G+ I IMGCIVNGPGEMADADFGYVG GR+ VG+ C Sbjct: 635 FNILQAARIRMSKTEFISCPGCGRTYFELEKTTALIKQRVSHLKGLKIGIMGCIVNGPGEMADADFGYVGSGKGRVSLYVGKEC 718
BLAST of CX294065 vs. ExPASy Swiss-Prot
Match: ISPG_CHLAB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlamydophila abortus GN=ispG PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.039e-24 Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 289 EAPGQDFDFLRDTSFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPGEMADADFGYVGGAPG 552 + P +R+ +F LQ +R KTEY+SCP CGRTLFDL E++ I E+T HL G+ IA+MGCIVNGPGEMADADFG+VG G Sbjct: 481 DLPNIPLSTVREIAFGTLQSAGVRLVKTEYISCPGCGRTLFDLPEVTKRIHERTQHLVGLKIAVMGCIVNGPGEMADADFGFVGSKTG 568 The following BLAST results are available for this feature:
BLAST of CX294065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294065 ID=CX294065; Name=CX294065; organism=Citrus clementina; type=EST; length=616bpback to top |