CX294080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.098e-29 Identity = 73/164 (44.51%), Postives = 105/164 (64.02%), Query Frame = 3 Query: 69 LQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPN--PVHLTVDTGFRNGEGTVKAYVSVNLSLG-DRQLAAQFQKILL 551 +Q S + S +T KVHP+VIFNI D Y+RR +RVIGTLLG DG ++IRN + V H+E ++Q+A+++EY ML HLK +P+E I+GW++TG + S I+ FY E+ N P+HLTVDTG N + AY++ NLSL + L + F ++ L Sbjct: 1 MQKETSIFLPSQVTVKVHPVVIFNILDHYIRRNVGQDRVIGTLLG-FNNDGVLEIRNCFPVVHSE-TEQIAVEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHAYMAHNLSLNPESSLGSYFSQLPL 162
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_BOMMO (Eukaryotic translation initiation factor 3 subunit F OS=Bombyx mori GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.937e-27 Identity = 62/148 (41.89%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 102 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 NI+ KVHP+V+F I D Y RR + RVIGTL G+ G V++ N + VPH E +DQV ++ Y + + + +VN E IVGW++TG VT S++IHE+Y RE PVH+T+DT G ++AYV V L + + + F + Sbjct: 4 NISVKVHPVVLFQIVDAYERRNADSHRVIGTLWGTS-DKGVVEVTNCFCVPHKEHADQVEAELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGCMFTPV 150
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_MALGO (Eukaryotic translation initiation factor 3 subunit F OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MGL_1945 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 7.998e-25 Identity = 72/168 (42.86%), Postives = 101/168 (60.12%), Query Frame = 3 Query: 33 KKIRMAASDRTVLQFGPSSAV---TSNITA-KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVP--NPVHLTVDTGF---RNGEGTVKAYVSVNL 503 +K +AAS L F P+++ + +ITA KVHP+ +F+I D Y+RR RVIGTLLG+ + V++RN++ VPH E D Q+ LD E+H ML HL+V P EV++GW+ST + SALI + Y RE +HLT++T NG G V+ YVS L Sbjct: 3 EKSTLAASSALHLSFPPAASGVFHSRSITAVKVHPVALFSILDHYLRRDVSQPRVIGTLLGT-RSESEVEVRNAFAVPHGESQDPWQIHLDAEHHRRMLDLHLRVRPDEVVLGWYSTNTELNSNSALIQDHYSRETAPHQAIHLTLNTNVADEANGLG-VQCYVSALL 168
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_PHANO (Eukaryotic translation initiation factor 3 subunit F OS=Phaeosphaeria nodorum GN=SNOG_04858 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.508e-23 Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 3 Query: 96 TSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 T+ + + P +F+I D +RRP ERVIGTLLG+ DGT ++IRN Y VPH E ++QV +D++Y ML HL+ NP+EV+VGW++T + SALI FY ++ P+P VHLTV T Sbjct: 25 TAPLNVAIQPQAVFSILDHSLRRPADQERVIGTLLGTRSEDGTEIEIRNCYAVPHTETAEQVEVDMDYQKQMLALHLRANPREVLVGWYATSSDLNTFSALIQNFYSQQGDGTWPHPAVHLTVST 149
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_SCHPO (Eukaryotic translation initiation factor 3 subunit F OS=Schizosaccharomyces pombe GN=eif3f PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.573e-23 Identity = 64/170 (37.65%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 45 MAASDRTVLQFGPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREV----------PNP-VHLTVDTGFRNGEGTVKAYVSVNLSLGDR 518 MA + VL S+ +S + + P V+F+I D R+ + +RVIGTLLG+ DG ++I++ + VPHNE S+QV +++EYH M HLK NP+EV+VGW++T + SALI Y P+P VHLTV+T + +K YVS + + +R Sbjct: 1 MALGTKHVLHLTKPSSRSSPLNIVIEPAVLFSILDHSTRKSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSEQVEVEMEYHRAMYHLHLKANPREVVVGWYATSPDLDAFSALIQNLYASPAEPGTAPLGTYPHPCVHLTVNTDV-SSPLAIKTYVSSPVGITER 169
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPOR (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus oryzae GN=AO090005001590 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.777e-23 Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 S+ T+ + +HP +F+I D +RR ERVIGTLLG+ DGT V+IR ++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T Sbjct: 21 SAPTTAPLNVVIHPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRTTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVST 149
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPCL (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus clavatus GN=ACLA_026150 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.852e-22 Identity = 64/143 (44.76%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDTGFRNGEGTVKAYVS 494 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T T +AY+S Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIET-RAYIS 162
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_NEOFI (Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_016300 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.337e-22 Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVST 149
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPTN (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_08559 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.337e-22 Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 S+ T+ + + P +F+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T Sbjct: 21 SAPTTAPLNVVIQPQALFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVST 149
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFU (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus GN=AFUA_1G09330 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.337e-22 Identity = 60/129 (46.51%), Postives = 81/129 (62.79%), Query Frame = 3 Query: 84 SSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCRE----VPNP-VHLTVDT 452 S+ T+ + + P IF+I D +RR ERVIGTLLG+ DGT V+IR+++ V H E +DQV +D+EY ML HLK NP+EV+VGW++T + SALI FY + P+P VHLTV T Sbjct: 21 SAPTTAPLNVVIQPQAIFSILDHSLRRNADQERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEVDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVST 149 The following BLAST results are available for this feature:
BLAST of CX294080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294080 ID=CX294080; Name=CX294080; organism=Citrus clementina; type=EST; length=619bpback to top |