CX294080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.148e-70 Identity = 126/170 (74.12%), Postives = 145/170 (85.29%), Query Frame = 3 Query: 48 AASDRTVLQF----GPSSAVTSNITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 A S+ T+LQF +SA TS +TA++HPLVIFN+ DC+VRRPD AERVIGTLLGS+LPDGTVDIRNSY VPHNE SDQVA+DI+YHH ML SHLKVN +E IVGW+STG GV GGS+LIH+FY REVPNP+HLTVDTGF NGEGT+KA+VS NLSLGDRQL A FQ+I Sbjct: 3 ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEI 172
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34 Identity = 67/141 (47.52%), Postives = 98/141 (69.50%), Query Frame = 3 Query: 114 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQF 536 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 236
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34 Identity = 67/141 (47.52%), Postives = 98/141 (69.50%), Query Frame = 3 Query: 114 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQF 536 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 236
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 9.426e-34 Identity = 67/141 (47.52%), Postives = 98/141 (69.50%), Query Frame = 3 Query: 114 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQF 536 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDT +NG ++KAYVS + + R + F Sbjct: 93 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAYVSTLMGVPGRTMGVMF 232
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.231e-33 Identity = 67/141 (47.52%), Postives = 99/141 (70.21%), Query Frame = 3 Query: 114 KVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQF 536 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+Y RE PNP+HLTVDTG ++G ++KAYVS + + R + F Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSRESPNPIHLTVDTGLQHGRMSIKAYVSTLMGVPGRTMGVMF 236
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.823e-32 Identity = 68/148 (45.95%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 102 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 N+T +VHP+V+F + D Y RR + RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVNP E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G ++AYV + L + + F I Sbjct: 5 NLTVRVHPVVLFQVVDAYERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGGKSGCMFTPI 151
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_AEDAE (Eukaryotic translation initiation factor 3 subunit F OS=Aedes aegypti GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.353e-31 Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 102 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 N+T +VHP+V+F I D Y RR +ERVIGTLLGSV G V++ N + VPH E +DQV ++ Y + + +VNP E IVGW++TG VT S++IHE+Y RE NP+HLT+DT +KAYV V+L + + F I Sbjct: 9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-DKGVVEVTNCFCVPHKEHADQVEAELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLSAARMGIKAYVCVSLGVPGGKTGCMFTPI 155
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EIF3F_CULQU (Eukaryotic translation initiation factor 3 subunit F OS=Culex quinquefasciatus GN=eIF3-S5 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.379e-31 Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 102 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 N+T +VHP+V+F I D Y RR +ERVIGTLLGSV G V++ N + VPH E +DQV ++ Y + + +VNP E IVGW++TG VT S++IHE+Y RE NP+HLT+DT +KAYV V+L + + F I Sbjct: 9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-EKGIVEVTNCFCVPHKEHADQVEAELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLTAARMGIKAYVCVSLGVPGGKTGCMFTPI 155
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPS (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.274e-30 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 102 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 N+T +VHP+V+F + D + RR ++ RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F I Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNAESHRVIGTLLGSV-EKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPI 151
BLAST of CX294080 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.274e-30 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 102 NITAKVHPLVIFNISDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEFYCREVPNPVHLTVDTGFRNGEGTVKAYVSVNLSLGDRQLAAQFQKI 545 N+T +VHP+V+F + D + RR ++ RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVN E +VGW++TG VT S++IHE+Y RE NPVHLTVDT + G +++YV + L + + F I Sbjct: 5 NLTVRVHPVVLFQVVDAFERRNAESHRVIGTLLGSV-EKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGGKTGCMFTPI 151 The following BLAST results are available for this feature:
BLAST of CX294080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294080 ID=CX294080; Name=CX294080; organism=Citrus clementina; type=EST; length=619bpback to top |