CX294081
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 6.354e-36 Identity = 82/160 (51.25%), Postives = 113/160 (70.62%), Query Frame = 3 Query: 63 MSDEEH---HFKSKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALRI 527 MSD+ H HF + D+GA+ T+P+Q +RKN +++IK RPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L Q++D + + + VL V+S++GEE I ++ Sbjct: 1 MSDDHHDDEHFHT-GDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWKV 157
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 8.299e-36 Identity = 69/146 (47.26%), Postives = 110/146 (75.34%), Query Frame = 3 Query: 90 SKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALRI 527 ++A +GAS T+P Q +RKNG++VIK PCK+V++STSKTGKHGHAK + IDIF+GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + ++ EGK+ +++V+S++G+E + ++++ Sbjct: 13 AQAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVKV 156
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.855e-33 Identity = 76/157 (48.41%), Postives = 109/157 (69.43%), Query Frame = 3 Query: 72 EEHHFKSK---ADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALRI 527 E+HH + + A++GA+ T+P+Q +RKN +++I+ RPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + L +++ + + VL V+++ GEE I +I Sbjct: 3 EDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGD-LGNTIREALEKDEGSVLVQVVAACGEEAILGYKI 157
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.627e-15 Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 117 TYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALR 524 T P++AG I+ +IVI PCKVVEV SKTGKHG AK VGI F G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + ++L +G + + V MG +I +R Sbjct: 3 TRPEEAGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG------VEVEVWEVMGRHKIMRVR 131
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_SCHMA (Eukaryotic translation initiation factor 5A (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.523e-13 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 3 Query: 99 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVG 248 D GASKT P+Q +RK G++V+K RPCK+VE+STSKTGKHG AK H VG Sbjct: 3 DFGASKTLPKQCSALRKGGHVVMKDRPCKIVEMSTSKTGKHGSAKVHLVG 52
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: YE034_YEAST (Putative uncharacterized protein YEL034C-A OS=Saccharomyces cerevisiae GN=YEL034C-A PE=5 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 7.558e-13 Identity = 46/126 (36.51%), Postives = 68/126 (53.97%), Query Frame = -1 Query: 144 EGTDLLLAH*RHDSQNQVLPLSKTVLELGQQSLIGWEPQIILGVPIFSQQTHKSILRNINQLIVGTVDMGNITVMRRGDNIFQLLSTEDINSNKVALSMTVLSSLGGGDFHNLAGTAFDDDVAVLT 521 EG H D +QVL K+ L+ Q W IIL V + Q ++++ N+ QL+ ++D N V+ R IFQLL++EDIN N++ S+TVL+SL G NL + DD+ VL+ Sbjct: 31 EGDGGFFTHSGDDGNHQVLTFIKSSLQTVTQFTF-WSLDIILSVTVHVHQRQETVI-NVQQLVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLS 154
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.684e-12 Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 3 Query: 111 SKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 452 SKTY G ++ +I+I PCK+VE+S +KTGKHG AK H V I + SG K + P +VP + + Q++ I+ D V L+ ++ LP +E L ++L+ G Sbjct: 2 SKTYAT-LGELKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPG 113
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_CALMQ (Translation initiation factor 5A OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=eIF5A PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.872e-12 Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 3 Query: 117 TYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISED 359 T AG I++ YI+I + PC+VVEV SKTGKHG AK VGI + G K +VP+ +VP + + Q+I IS D Sbjct: 3 TRTASAGDIKEGSYIMIDNMPCRVVEVEKSKTGKHGSAKARIVGIGVIDGVKRTIVVPTDAAVEVPVIEKFTAQVISISGD 83
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12 Identity = 36/106 (33.96%), Postives = 59/106 (55.66%), Query Frame = 3 Query: 135 GTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 452 G ++ Y+VI PC+VVE+S +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + EN T D+ PTD ++ +++ G Sbjct: 9 GDLKVGNYVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPG 113
BLAST of CX294081 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.899e-12 Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 111 SKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 452 SKTY G ++ +I+I PC++VE+S +KTGKHG AK H V I +F+G K + P +VP + + Q+I D + E T ++ P+DE L +LK G Sbjct: 2 SKTYAT-LGELKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPG 113 The following BLAST results are available for this feature:
BLAST of CX294081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294081 ID=CX294081; Name=CX294081; organism=Citrus clementina; type=EST; length=560bpback to top |