CX294110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_CALS8 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=clpX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.883e-11 Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY++LF+M+ V+L F ++AL IA KA +NTGARGLRAI+E I+ + M+EIP Sbjct: 329 LVKQYQKLFAMDGVELEFEKEALEAIADKAIERNTGARGLRAIMEEIMLDVMFEIP 384
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_YERPS (ATP-dependent Clp protease ATP-binding subunit clpX OS=Yersinia pseudotuberculosis GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 31/58 (53.45%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDV 174 L KQY+ LFS+ V+L F ++AL IAKKA A+ TGARGLR+I+E +L + MY++P + Sbjct: 333 LTKQYQALFSLEGVELEFRDEALTAIAKKAMARKTGARGLRSIVEGVLLDTMYDLPSM 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_VIBSL (ATP-dependent Clp protease ATP-binding subunit clpX OS=Vibrio splendidus (strain LGP32) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 33/56 (58.93%), Postives = 40/56 (71.43%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY LF + + +L F E ALR IAKKA + TGARGLR+ILE +L E MYE+P Sbjct: 335 LTKQYAALFELEDTELEFREDALRAIAKKAMNRKTGARGLRSILEGVLLETMYELP 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_SHEAM (ATP-dependent Clp protease ATP-binding subunit clpX OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY LF M NV+L F E AL+ IA+KA ++ TGARGLR+I+E IL + MY++P Sbjct: 333 LTKQYAALFEMENVELEFREDALKAIAQKAMSRKTGARGLRSIVEGILLDTMYDLP 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHILW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 7 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 KQY+RLF M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 335 KQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHILO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium loti GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF M NV L F E AL IAK+A + TGARGLR+I+E+IL + M+E+P Sbjct: 332 LVKQYQRLFEMENVDLTFHENALSAIAKRAIERKTGARGLRSIMEAILLDTMFELP 387
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHIEC (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 7 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 KQY+RLF M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 335 KQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHIE6 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhizobium etli (strain CIAT 652) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 32/57 (56.14%), Postives = 44/57 (77.19%), Query Frame = 1 Query: 7 KQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 KQY+RLF M +V+L F E ALR IA+KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 335 KQYQRLFEMEDVELTFHEDALREIARKAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_PARDP (ATP-dependent Clp protease ATP-binding subunit clpX OS=Paracoccus denitrificans (strain Pd 1222) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 32/56 (57.14%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF + +VKL FTE AL IAK+A + TGARGLR+I+E IL + M+++P Sbjct: 329 LVKQYQRLFDLESVKLTFTEDALTAIAKRAIKRKTGARGLRSIMEDILLDTMFDLP 384
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_NEIMF (ATP-dependent Clp protease ATP-binding subunit clpX OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=clpX PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.765e-11 Identity = 33/59 (55.93%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+ LF M NV+L F E ALR IA++A + TGARGLR+I+E L + MY +PD+K Sbjct: 332 LVKQYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLK 390 The following BLAST results are available for this feature:
BLAST of CX294110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294110 ID=CX294110; Name=CX294110; organism=Citrus clementina; type=EST; length=538bpback to top |