CX294110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BRUMB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=clpX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 332 LVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BRUAB (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella abortus GN=clpX PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 332 LVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BRUA2 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella abortus (strain 2308) GN=clpX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 332 LVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BRUA1 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Brucella abortus (strain S19) GN=clpX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M NV+L F + ALR IA KA + TGARGLR+I+E IL + M+E+P ++ Sbjct: 332 LVKQYQRLFDMENVELVFHDDALRAIANKAVERKTGARGLRSIMEKILLDTMFELPTLE 390
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BRASO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bradyrhizobium sp. (strain ORS278) GN=clpX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M N++L F ++AL +++KA + TGARGLR+ILESIL E M+++P ++ Sbjct: 330 LVKQYQRLFEMENIELTFADEALGAVSRKAIERKTGARGLRSILESILLETMFDLPGLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_BRAJA (ATP-dependent Clp protease ATP-binding subunit clpX OS=Bradyrhizobium japonicum GN=clpX PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.207e-11 Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M N++L F ++AL +A+KA + TGARGLR+ILE+IL E M+++P ++ Sbjct: 330 LVKQYQRLFEMENIELTFADEALGAVARKAIERKTGARGLRSILEAILLETMFDLPGLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_ZYMMO (ATP-dependent Clp protease ATP-binding subunit clpX OS=Zymomonas mobilis GN=clpX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.883e-11 Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY++LF + + KL FTE AL IAKK + TGARGLR+ILE IL + M+E+P ++ Sbjct: 330 LVKQYQKLFELEDAKLEFTEDALAAIAKKGIERKTGARGLRSILEGILLDTMFELPSLE 388
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_THEYD (ATP-dependent Clp protease ATP-binding subunit clpX OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=clpX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.883e-11 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY++LFS++ VKL FT+ ALR IAKKA + TGAR LR+ILE I+ + MY IP Sbjct: 321 LVKQYQKLFSIDGVKLTFTDDALRAIAKKAIERKTGARALRSILEDIMLDVMYLIP 376
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_SINMW (ATP-dependent Clp protease ATP-binding subunit clpX OS=Sinorhizobium medicae (strain WSM419) GN=clpX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.883e-11 Identity = 32/59 (54.24%), Postives = 46/59 (77.97%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIPDVK 177 L KQY+RLF M +V+L+F E ALR IA++A + TGARGLR+I+E IL + M+E+P ++ Sbjct: 333 LVKQYQRLFEMEDVELNFHEDALREIARRAIVRKTGARGLRSIMEKILLDTMFELPTLE 391
BLAST of CX294110 vs. ExPASy Swiss-Prot
Match: CLPX_RHOE4 (ATP-dependent Clp protease ATP-binding subunit clpX OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=clpX PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.883e-11 Identity = 33/56 (58.93%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 1 LGKQYKRLFSMNNVKLHFTEKALRVIAKKATAKNTGARGLRAILESILTEAMYEIP 168 L KQY+RLF M+ V+L FTE+AL IA +A + TGARGLRAI+E +L MY+IP Sbjct: 333 LVKQYRRLFDMDGVELEFTEEALDAIADQAILRGTGARGLRAIMEEVLLPVMYDIP 388 The following BLAST results are available for this feature:
BLAST of CX294110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294110 ID=CX294110; Name=CX294110; organism=Citrus clementina; type=EST; length=538bpback to top |