CX294114

Overview
NameCX294114
Unique NameCX294114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: DKGA_CORSC (2,5-diketo-D-gluconic acid reductase A OS=Corynebacterium sp. (strain ATCC 31090) GN=dkgA PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 4.820e-17
Identity = 43/107 (40.19%), Postives = 68/107 (63.55%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKIN 330
            AVNQ+E++PA+QQR++ ++  +  + + ++ PLG      G   +   E +   A AHGKT AQ  LRW +++G +V  KS  +ERL+ENLD+FD+ LTD +   I+
Sbjct:  158 AVNQIELHPAYQQREITDWAAAHDVKIESWGPLGQ-----GKYDLFGAEPVTAAAAAHGKTPAQAVLRWHLQKGFVVFPKSVRRERLEENLDVFDFDLTDTEIAAID 259          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 4.820e-17
Identity = 42/108 (38.89%), Postives = 67/108 (62.04%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHD 315
            Y  AVNQ+E +P   Q +L ++C+SK I+VTA+SPLG+    W   +   ++ +  +K IA  H KT AQV +R+ +++  +V+ KS   ER+ EN  +FD+ L+  D
Sbjct:  178 YKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIAAKHNKTTAQVLIRFPMQRNLVVIPKSVTPERIAENFKVFDFELSSQD 285          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17
Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHD 315
            Y  AVNQ+E +P   Q +L ++C SK I+VTA+SPLG+    W   +   ++ +  +K IAD H KT AQV +R+ +++  +V+ KS    R+ EN  +FD+ L+  D
Sbjct:  178 YKPAVNQIECHPYLTQEKLIQYCHSKGIVVTAYSPLGSPDRPWAKPEDPSLLEDPRIKAIADKHKKTTAQVLIRFPMQRNLVVIPKSVTPARIAENFQVFDFELSSED 285          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17
Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 1
Query:   16 NQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKI 327
            NQ+E +P   Q+ L  FC+S+ + VTA+ PLG  GS  G + +++N  +K+IA  HGK+ AQ+ +R+ I++  IV+  S     +KEN+ +FD+ LT HD D I
Sbjct:  193 NQIECHPYLTQKNLISFCQSRDVSVTAYRPLG--GSCEGVD-LIDNPVIKRIAKEHGKSPAQILIRFQIQRNVIVIPGSITPSHIKENIQVFDFELTQHDMDNI 293          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17
Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGS-SW---GTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDH---DYDKINQ 333
            Y    NQVE +P + Q +L +FC+   I++ A SPLG   + SW    +  ++N+E L  +   + KT AQ+ LR+ I++G +V+ KSF  ER+KEN  IFD++LT+    D D +N+
Sbjct:  186 YKPVTNQVECHPYFTQTKLLKFCQQHDIVIVAHSPLGTCRNPSWVNVSSPPLLNDELLTSLGKKYNKTQAQIVLRFNIQRGIVVIPKSFTPERIKENFQIFDFSLTEEEMKDIDALNK 303          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.222e-17
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKIN 330
            Y    NQVE +P   Q +L EFCKS  I++ A++ LGA   S   N     ++ +  L  IA  H +T A V LR+ +++G +V+AKSFNK+R+KEN+ +FD+ LT  D   I+
Sbjct:  184 YKPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGAQLLSEWVNSNNPVLLEDPVLCAIAKKHKQTPALVALRYQVQRGVVVLAKSFNKKRIKENMQVFDFELTPEDMKAID 297          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 8.222e-17
Identity = 47/114 (41.23%), Postives = 69/114 (60.53%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKIN 330
            Y    NQVE +P   Q +L EFCKS  I++ A++ LGA   S   N     ++ +  L  IA  H +T A V LR+ +++G +V+AKSFNK+R+KEN+ +FD+ LT  D   I+
Sbjct:  184 YKPVCNQVECHPYLNQSKLLEFCKSHDIVLVAYAALGAQLLSEWVNSNNPVLLEDPVLCAIAKKHKQTPALVALRYQVQRGVVVLAKSFNKKRIKENMQVFDFELTPEDMKAID 297          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.222e-17
Identity = 42/111 (37.84%), Postives = 69/111 (62.16%), Query Frame = 1
Query:   16 NQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTN----QVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            NQVE +P + Q +L +FC+   I++TA+SPLG + +    N     ++ +  L  +   + KT AQ+ LR+ I++G +V+ KSFN ER+KEN  IFD++LT+ +   I  +
Sbjct:  192 NQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEAL 302          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: Y2407_MYCS2 (Uncharacterized oxidoreductase MSMEG_2407 OS=Mycobacterium smegmatis GN=MSMEG_2407 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16
Identity = 42/107 (39.25%), Postives = 67/107 (62.62%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKIN 330
            AVNQ+E++P   Q  LRE     +I+  A+ PLG         +++++ A+  IA+AHG+T AQV LRW I+ G +V+++S N ER+  NLD+F + LT  + + +N
Sbjct:  166 AVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGVG-------RLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLN 265          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: Y1918_MYCSJ (Uncharacterized oxidoreductase Mjls_1918 OS=Mycobacterium sp. (strain JLS) GN=Mjls_1918 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQ-HRMMPRDEYIT 375
            A+NQ+E++P   Q +LRE      I+  A+ PLG         +++++ A+  +A AH KT AQV LRW I+ G +V+A+S N +R+  NL++FD+ LTD +   +N + +  R  P  E  T
Sbjct:  166 AINQIELHPLLNQAELREVNAGYGIVTEAYGPLGVG-------RLLDHAAVTGVAQAHDKTPAQVLLRWSIQLGNVVIARSANPDRITSNLEVFDFELTDDEMATLNGLDEGTRFRPDPETYT 281          
The following BLAST results are available for this feature:
BLAST of CX294114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
DKGA_CORSC4.820e-1740.192,5-diketo-D-gluconic acid reductase A OS=Coryneba... [more]
ALDR_HUMAN4.820e-1738.89Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
ALDR_RABIT6.295e-1738.89Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
AKCL2_HUMAN6.295e-1741.351,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]
AK1D1_MOUSE6.295e-1738.983-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
PGFS2_BOVIN8.222e-1741.23Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
PGFS1_BOVIN8.222e-1741.23Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1D1_HUMAN8.222e-1737.843-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
Y2407_MYCS21.832e-1639.25Uncharacterized oxidoreductase MSMEG_2407 OS=Mycob... [more]
Y1918_MYCSJ1.832e-1636.59Uncharacterized oxidoreductase Mjls_1918 OS=Mycoba... [more]

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Properties
Property NameValue
Genbank descriptionC05011C04SK AbsAOv1 Citrus clementina cDNA clone C05011C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294114 ID=CX294114; Name=CX294114; organism=Citrus clementina; type=EST; length=490bp
TACGGCCGGGCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAG
ACAGCTCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCT
CTCCCTTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGTTATGAAC
AATGAAGCACTGAAGCAGATTGCTGACGCTCACGGCAAGACTGTTGCTCA
GGTTTGTCTTCGATGGATAATTGAGCAAGGGGCGATTGTTGTTGCTAAGA
GCTTCAACAAGGAGAGACTGAAGGAGAACCTGGATATCTTTGACTGGGCA
CTAACTGATCACGATTATGACAAGATTAATCAAATCCCGCAGCACAGAAT
GATGCCCAGAGATGAGTATATTACCCCTCATGGGCCATTCAAGACACTTG
AAGAGCTGTGGGATGAGTAAATCCCCCTTTTAATATCTAATGTATATTCT
ACTTCTTCTGCAATGGAAATTAGCTTTAAGTAAAAAAAAA
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