CX294114

Overview
NameCX294114
Unique NameCX294114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            A NQ+E++P   Q +L  FCK K I+V A+SP G+A +      ++  +A+  +A  HG   AQ+ + W I++G +V+AKS N ER+  N  IF   L + D+  I+ +
Sbjct:  190 ATNQIEIHPLLPQDELIAFCKEKGIVVEAYSPFGSANAP-----LLKEQAIIDMAKKHGVEPAQLIISWSIQRGYVVLAKSVNPERIVSNFKIF--TLPEDDFKTISNL 291          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 43/116 (37.07%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAG-------SSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            AV Q+E +P  QQ +L E+ +   I +T +S  G           +  T  +  +E +K IAD HGK+ AQV LRW  ++   V+ KS N ERL +NL + D+ LT  D D I ++
Sbjct:  190 AVLQIEHHPYLQQPKLIEYVQKAGIAITGYSSFGPQSFLELESKRALNTPTLFEHETIKLIADKHGKSPAQVLLRWATQRNIAVIPKSNNPERLAQNLSVVDFDLTKDDLDNIAKL 305          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.451e-13
Identity = 44/116 (37.93%), Postives = 65/116 (56.03%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAA-------GSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            +V QVE +P  QQ +L EF +S+ I VTA+S  G         G +  T+ +  NE +K IA  HGK+ AQV LRW  ++G  ++ KS    RL EN D+  + L + D+  I ++
Sbjct:  184 SVLQVEHHPYLQQPRLIEFAQSRGIAVTAYSSFGPQSFVELNQGRALNTSPLFENETIKAIAAKHGKSPAQVLLRWSSQRGIAIIPKSNTVPRLLENKDVNSFDLDEQDFADIAKL 299          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: A1A1B_DANRE (Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=akr1a1b PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.451e-13
Identity = 40/141 (28.37%), Postives = 73/141 (51.77%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQ------------HRMMPRDEYITPHGPF 390
            V QVE +P   Q +L   C+ + +++TA+SPLG+   +W       ++   A+  +A  + KT AQ+ +RW  ++G + + KS  + R+KEN+ +FD+ L   +  ++  + +             + +PRD    PH PF
Sbjct:  181 VLQVESHPYLAQVELLSHCRDRGLVMTAYSPLGSPDRAWKHPDEPVLLEEPAIAALAKKYNKTPAQIIIRWQTQRGVVTIPKSITQSRIKENIQVFDFTLESEEMSQVTALHRGWRYIVPTITVDGKSVPRDAG-HPHYPF 320          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: DKGA_SALTY (2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhimurium GN=dkgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.476e-13
Identity = 36/117 (30.77%), Postives = 67/117 (57.26%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRD 363
            +NQ+E++P  QQRQL  +  +  I   ++SPL   G       V + + ++++AD +GKT AQ+ +RW ++ G +V+ KS    R+ EN  ++D+ L   +  +I ++ Q + +  D
Sbjct:  158 INQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGEG-----VFDQKVIRELADKYGKTPAQIVIRWHLDCGLVVIPKSVTPSRIAENFAVWDFRLDKDELGEIAKLDQGKRLGPD 269          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: DKGA_SALTI (Putative 2,5-diketo-D-gluconic acid reductase A OS=Salmonella typhi GN=dkgA PE=5 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.476e-13
Identity = 36/117 (30.77%), Postives = 67/117 (57.26%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRD 363
            +NQ+E++P  QQRQL  +  +  I   ++SPL   G       V + + ++++AD +GKT AQ+ +RW ++ G +V+ KS    R+ EN  ++D+ L   +  +I ++ Q + +  D
Sbjct:  158 INQIELHPLMQQRQLHAWNATHKIQTESWSPLAQGGEG-----VFDQKVIRELADKYGKTPAQIVIRWHLDCGLVVIPKSVTPSRIAENFAVWDFRLDKDELGEIAKLDQGKRLGPD 269          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: YER5_SCHPO (Uncharacterized oxidoreductase C2F3.05c OS=Schizosaccharomyces pombe GN=SPAC2F3.05c PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 4.223e-13
Identity = 36/110 (32.73%), Postives = 69/110 (62.73%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQ 342
            VNQ+E++P   Q+++ ++C+SK I + A++PL   G  +G  Q++       IA  + K+ AQ+ +R+ +++G IV+ KS    R+KEN D+FD+ ++  D +K+  + +
Sbjct:  160 VNQIELHPFCSQQKVVDYCESKGIQLAAYAPL-VHGEKFGNKQLL------AIASKYNKSEAQIMIRYCLQRGFIVLPKSSTPRRIKENGDVFDFEISKEDMEKLYNLDE 262          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 4.223e-13
Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGA-AGSSW---GTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHD------------YDKINQIPQHRMMP-RDEY 369
            Y    NQVE +    Q +L  +CKSK I++  +S LG+    +W       ++++  L +IA  + +T A+V +R+I+++G +V+AKSF   R+K+NL +F++ L   D            Y    ++ QH   P  DEY
Sbjct:  185 YKPVCNQVECHVYLNQNKLHSYCKSKDIVLVTYSVLGSHRDRNWVDLSLPVLLDDPILNKIAAKYNRTSAEVAMRFILQKGIVVLAKSFTPARIKQNLGVFEFELKPEDMKTLESLDRNLHYGPFREVKQHPEYPFHDEY 324          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: DKGA_YERPE (2,5-diketo-D-gluconic acid reductase A OS=Yersinia pestis GN=dkgA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.515e-13
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 1
Query:   13 VNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            VNQ+E++P  QQRQL  +  +  I   ++SPL   G       V + E ++++A  + KT AQ+ +RW ++ G IV+ KS    R++EN ++FD+ L   +   I ++
Sbjct:  158 VNQIELHPLLQQRQLHAWNATHHIATESWSPLAQGGKG-----VFDQEIIRKLAQQYNKTPAQIVIRWHLDSGLIVIPKSVTPARIRENFEVFDFKLQKEELLAITKL 260          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1A1_CHICK (Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.515e-13
Identity = 34/112 (30.36%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            AV QVE +P   Q +L   C+ + ++VTA+SPLG+    W       ++    +K++A+ + K+ AQ+ LRW  ++  + + KS    R+ +NL +FD++LT+ +   +  +
Sbjct:  183 AVLQVECHPYLAQNELIAHCQKRGLVVTAYSPLGSPDRMWKHPDEPVLLEEPGIKKLAEKYKKSPAQILLRWQAQRKVVTIPKSVTPARILQNLQVFDFSLTEEEMSHVGSL 294          
The following BLAST results are available for this feature:
BLAST of CX294114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
YPR1_YEAST8.508e-1436.70Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
XYL1_CANTR8.508e-1437.07NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
XYL1_PICST1.451e-1337.93NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
A1A1B_DANRE1.451e-1328.37Alcohol dehydrogenase [NADP+] B OS=Danio rerio GN=... [more]
DKGA_SALTY2.476e-1330.772,5-diketo-D-gluconic acid reductase A OS=Salmonel... [more]
DKGA_SALTI2.476e-1330.77Putative 2,5-diketo-D-gluconic acid reductase A OS... [more]
YER5_SCHPO4.223e-1332.73Uncharacterized oxidoreductase C2F3.05c OS=Schizos... [more]
CRO_RANCA4.223e-1331.43Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
DKGA_YERPE5.515e-1333.332,5-diketo-D-gluconic acid reductase A OS=Yersinia... [more]
AK1A1_CHICK5.515e-1330.36Alcohol dehydrogenase [NADP+] OS=Gallus gallus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05011C04SK AbsAOv1 Citrus clementina cDNA clone C05011C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294114 ID=CX294114; Name=CX294114; organism=Citrus clementina; type=EST; length=490bp
TACGGCCGGGCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAG
ACAGCTCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCT
CTCCCTTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGTTATGAAC
AATGAAGCACTGAAGCAGATTGCTGACGCTCACGGCAAGACTGTTGCTCA
GGTTTGTCTTCGATGGATAATTGAGCAAGGGGCGATTGTTGTTGCTAAGA
GCTTCAACAAGGAGAGACTGAAGGAGAACCTGGATATCTTTGACTGGGCA
CTAACTGATCACGATTATGACAAGATTAATCAAATCCCGCAGCACAGAAT
GATGCCCAGAGATGAGTATATTACCCCTCATGGGCCATTCAAGACACTTG
AAGAGCTGTGGGATGAGTAAATCCCCCTTTTAATATCTAATGTATATTCT
ACTTCTTCTGCAATGGAAATTAGCTTTAAGTAAAAAAAAA
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