CX294114

Overview
NameCX294114
Unique NameCX294114
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.097e-12
Identity = 40/136 (29.41%), Postives = 75/136 (55.15%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQH-RMMPRDEY-ITPHGPF 390
            Y    NQVE +    Q +L  +CK   I++ A+  LG     +  N+    ++++  L  +A  + +T A + LR+ +++G + +AKSFN+ER++EN+ +FD+ L   D   ++ + ++ R  P D +   P+ PF
Sbjct:  184 YKPVCNQVECHLYLNQSKLLAYCKMNDIVLVAYGALGTQRYKYCINEDTPVLLDDPVLCAMAKKYKRTPALIALRYQLDRGIVALAKSFNEERIRENMQVFDFQLASDDMKILDGLDRNLRYFPADMFKAHPNFPF 319          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 6.097e-12
Identity = 37/139 (26.62%), Postives = 76/139 (54.68%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQHRMMPRDEYITPHGPFKTLEE 405
            Y    NQVE +    QR+L ++C+SK I++ A+  LG        +Q    ++N+  L  +A  + ++ A + LR++I++G + +A+SF +  ++ENL +F + L+  D   ++ + ++      E++  H  +  +EE
Sbjct:  184 YKPVCNQVECHLYLNQRKLLDYCESKDIVLVAYGALGTQRYKEWVDQNSPVLLNDPVLCDVAKKNKRSPALIALRYLIQRGIVPLAQSFKENEMRENLQVFGFQLSPEDMKTLDGLNKNFRYLPAEFLVDHPEYPFVEE 322          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 6.097e-12
Identity = 32/112 (28.57%), Postives = 65/112 (58.04%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            AV QVE +P   Q +L   C+++ + VTA+SPLG++  +W       ++    +  +A+ +G++ AQ+ LRW +++  I + KS    R+ +N+ +FD+  +  +  ++N +
Sbjct:  181 AVLQVECHPYLAQNELIAHCQARGLEVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGRSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNAL 292          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKIN 330
            AVNQVE++P   Q +LR+     +++  +++PL          Q+ +N  +  IA  +GKT  QV LRW ++ G  V+  S N E +  NLD+F++ L     D IN
Sbjct:  164 AVNQVELHPLLNQDELRKANAQHNVVTQSYTPLALG-------QLADNPTVTSIAGEYGKTPTQVLLRWNLQLGNAVIFGSSNAEHIATNLDVFEFELASQHMDAIN 263          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAA-------GSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            AV QVE +P  QQ +L E+ +   I VTA+S  G         G +  T  +  ++ +K IA  H K  A+V LRW  ++G  V+ KS   ERL +N    D+ LT  D+++I+++
Sbjct:  189 AVLQVEHHPYLQQPKLIEYAQKVGITVTAYSSFGPQSFVEMNQGRALNTPTLFEHDVIKAIAAKHNKVPAEVLLRWSAQRGIAVIPKSNLPERLVQNRSFNDFELTKEDFEEISKL 304          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 35/102 (34.31%), Postives = 58/102 (56.86%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHD 315
            A NQVE++P   Q +L++FC   +I +TA+SPLG           ++NE +  IA  + KT+  V  +W I++   V+ KS    R+ EN D+F++ + + D
Sbjct:  177 AANQVELHPFLSQPELKKFCDKHNIHLTAYSPLG-------NGAFVDNEEVGAIAKKYNKTIPNVLCKWAIQKNFSVIPKSSTPSRVAENFDLFNFEIEEAD 271          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 39/131 (29.77%), Postives = 74/131 (56.49%), Query Frame = 1
Query:   16 NQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQIPQH-RMMPRDEY-ITPHGPF 390
            NQVE +    Q +L  +CK   I++ A+  LG     +  N+    ++++  L  +A  + +T A + LR+ +E+G + + KSFN+ER++ENL +FD+ L   D + ++ + ++ R  P + +   P+ PF
Sbjct:  189 NQVECHLYLNQSKLLAYCKMNDIVLVAYGALGTQRYKYCINEDTPVLLDDPILCTMAKKYKRTPALIALRYQLERGIVTLVKSFNEERIRENLQVFDFQLASDDMEILDNLDRNLRYFPANMFKAHPNFPF 319          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 40/117 (34.19%), Postives = 63/117 (53.85%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREF-CKSKSIIVTAFSPLGAAGSSWGTN----QVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            Y    NQVE +P + Q +L E    S +  + A+SPLG   +    N     ++ +E L  +   + KT AQ+ LR+ I++G +V+ KS   ER+KEN  IFD++LT  +   I  +
Sbjct:  186 YKPVTNQVECHPYFTQTKLLEVSASSMTSFIVAYSPLGTCRNPLWVNVSSPPLLKDELLTSLGKKYNKTQAQIVLRFDIQRGLVVIPKSTTPERIKENFQIFDFSLTKEEMKDIEAL 302          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 1
Query:    1 YGRAVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHD 315
            Y    NQVE +P   Q +L +FCKSK I++ A+  LG        +Q    +++   L  +A  + +T A + LR+ +++G +V+  S  +ER+KEN+ +F++ L+  D
Sbjct:  184 YKPVCNQVECHPYLNQMKLLDFCKSKDIVLVAYGVLGTQRYGGWVDQNSPVLLDEPVLGSMAKKYNRTPALIALRYQLQRGIVVLNTSLKEERIKENMQVFEFQLSSED 292          
BLAST of CX294114 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.040e-11
Identity = 32/112 (28.57%), Postives = 64/112 (57.14%), Query Frame = 1
Query:   10 AVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ---VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 336
            AV QVE +P   Q +L   C+++ + VTA+SPLG++  +W       ++    +  +A+ +G + AQ+ LRW +++  I + KS    R+ +N+ +FD+  +  +  ++N +
Sbjct:  181 AVLQVECHPYLAQNELIAHCQARGLAVTAYSPLGSSDRAWRDPDEPVLLEEPVVLALAEKYGGSPAQILLRWQVQRKVICIPKSITPSRILQNIKVFDFTFSPEEMKQLNAL 292          
The following BLAST results are available for this feature:
BLAST of CX294114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
AKC1H_MOUSE6.097e-1229.41Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
AK1CD_MOUSE6.097e-1226.62Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
AK1A1_HUMAN6.097e-1228.57Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]
Y1744_MYCMM1.040e-1134.58Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
XYL1_CANSH1.040e-1135.34NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
ALRA_DICDI1.040e-1134.31Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
AKC1H_RAT1.040e-1129.77Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
AK1D1_RAT1.040e-1134.193-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
AK1CL_MOUSE1.040e-1132.11Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
AK1A1_PONAB1.040e-1128.57Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]

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Properties
Property NameValue
Genbank descriptionC05011C04SK AbsAOv1 Citrus clementina cDNA clone C05011C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294114 ID=CX294114; Name=CX294114; organism=Citrus clementina; type=EST; length=490bp
TACGGCCGGGCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAG
ACAGCTCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCT
CTCCCTTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGTTATGAAC
AATGAAGCACTGAAGCAGATTGCTGACGCTCACGGCAAGACTGTTGCTCA
GGTTTGTCTTCGATGGATAATTGAGCAAGGGGCGATTGTTGTTGCTAAGA
GCTTCAACAAGGAGAGACTGAAGGAGAACCTGGATATCTTTGACTGGGCA
CTAACTGATCACGATTATGACAAGATTAATCAAATCCCGCAGCACAGAAT
GATGCCCAGAGATGAGTATATTACCCCTCATGGGCCATTCAAGACACTTG
AAGAGCTGTGGGATGAGTAAATCCCCCTTTTAATATCTAATGTATATTCT
ACTTCTTCTGCAATGGAAATTAGCTTTAAGTAAAAAAAAA
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