CX294124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC2_TRIHA (Ubiquitin-conjugating enzyme E2 2 OS=Trichoderma harzianum GN=UBC2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.481e-23 Identity = 56/132 (42.42%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 31 GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 426 G A P +PD N+M W+ I G A T +E G F L + F E YP+KPP+ KF FHPNVY +G +CL IL N W P V +L IQ LL+ PN PA E +L+ + EY +RVR+ ++ Sbjct: 23 GVSASP--IPD---NVMTWNAVIIGPADTPFEDGTFRLVMQFEEQYPNKPPQVKFISQMFHPNVYANGELCLDIL--QNRWSPTYDVAAVLTSIQSLLNDPNTGSPANVEASNLYKDNRREYIKRVRETVER 147
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.108e-22 Identity = 56/132 (42.42%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 31 GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 426 G A P +PD N+M W+ I G A T +E G F L +HF E YP+KPP KF FHPNVY +G +CL IL N W P V +L IQ LL+ PN A E +L+ + EY +RVR+ ++ Sbjct: 23 GVSASP--VPD---NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDIL--QNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEK 147
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.108e-22 Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQ 426 N+++W I G + WEG F L+L FSE+YP+ P KF FHPNVY G++CL IL N W P + IL IQ LL PNP PA +E LF ++ EY R+V++ +Q Sbjct: 32 NILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDIL--QNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQ 147
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.447e-22 Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G A + + GG F +T+HF DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL PNP DP E H++ D A+Y+ R ++Y Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.889e-22 Identity = 49/115 (42.61%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + + + GG F +T+HF DYP KPPK F FHPNV +G++CL IL E W PA+T+ ++L+ I LL PNP DP E H++ D A+Y+ R ++Y Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.497e-22 Identity = 57/128 (44.53%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 31 GFVAKPETLPDGSVNLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQ 414 G A P LPD N+M W+ I G + T +E G F L L F E YP+KPP+ KF FHPNVY SG +CL IL N W P V IL +Q LL+ PN + PA E +L+ + Y +RVR+ Sbjct: 23 GVSASP--LPD---NVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDIL--QNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRE 143
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.179e-22 Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 +L W TI G A + + GG F L++HF DYP KPPK F +HPN+ +G++CL IL + W PA+T+ ++L+ I LL PNP DP E H++ D + Y+ R+ ++Y Sbjct: 29 DLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.225e-21 Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 85 WHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 W TI G + + GG F +++HF DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL PNP DP E H++ D A+Y+ R ++Y Sbjct: 33 WQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKY 145
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.225e-21 Identity = 50/113 (44.25%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVR 411 N++ W+ I G A T +E G F + L F E YP+KPP KF FHPNVY SG +CL IL N W P V IL +Q LL+ PN + PA E L+ +Y++RVR Sbjct: 32 NVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDIL--QNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVR 142
BLAST of CX294124 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.225e-21 Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 73 NLMVWHCTIPGKAGTDWEGGFFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDNGWRPAITVKQILVGIQDLLDQPNPADPAQTEGYHLFIQDAAEYKRRVRQQAKQY 429 +L W TI G + ++GG F LT+HF DYP KPPK F +HPN+ +G++CL IL W PA+TV ++L+ I LL PNP DP E H + D +Y R R+ ++Y Sbjct: 29 DLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQ--WSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKY 145 The following BLAST results are available for this feature:
BLAST of CX294124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 214
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294124 ID=CX294124; Name=CX294124; organism=Citrus clementina; type=EST; length=570bpback to top |