CX294126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECOL6 (Asparaginyl-tRNA synthetase OS=Escherichia coli O6 GN=asnS PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECOL5 (Asparaginyl-tRNA synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECOHS (Asparaginyl-tRNA synthetase OS=Escherichia coli O9:H4 (strain HS) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECO57 (Asparaginyl-tRNA synthetase OS=Escherichia coli O157:H7 GN=asnS PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECO24 (Asparaginyl-tRNA synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_DESDG (Asparaginyl-tRNA synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 10 VGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 +G DP +P+ K + + E+LR RPRTN A RIR +YA H+F ++ GF +HTPI+T SDCEGAGEMF+VTTL Sbjct: 97 LGKADPETFPLQKKRHSDEYLRTIAHLRPRTNKFGAAFRIRAEASYAVHSFFRENGFFNVHTPILTGSDCEGAGEMFRVTTL 178
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_BACCR (Asparaginyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 44/93 (47.31%), Postives = 62/93 (66.67%), Query Frame = 1 Query: 4 LDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEK 282 +D+ + + YP+ K + T E+LR RPRTN +A R+R+ A+A H F Q++GF+++HTPIIT SD EGAGEMF+VTT D + L K Sbjct: 96 IDIEGLSDSDYPLQKKRHTFEYLRTIAHLRPRTNAFSATFRVRSIAAFAIHQFFQERGFVHVHTPIITGSDTEGAGEMFRVTT--QDLNNLPK 186
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_MYXXD (Asparaginyl-tRNA synthetase OS=Myxococcus xanthus (strain DK 1622) GN=asnS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.108e-18 Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YPI + TLEFLRD R RTNT +AV R+R+ A A H F ++GF +++TPIIT SD EGAG+MF+V+TL Sbjct: 105 DPDTYPIQPKQHTLEFLRDVAHLRVRTNTFSAVTRVRHRAAQAVHRFFDEEGFFWVNTPIITASDAEGAGQMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_HAES2 (Asparaginyl-tRNA synthetase OS=Haemophilus somnus (strain 2336) GN=asnS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.108e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 106 DPETYPMSAKRHSIEYLREVAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTL 183
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_HAES1 (Asparaginyl-tRNA synthetase OS=Haemophilus somnus (strain 129Pt) GN=asnS PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 6.108e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 106 DPETYPMSAKRHSIEYLREVAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTL 183 The following BLAST results are available for this feature:
BLAST of CX294126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294126 ID=CX294126; Name=CX294126; organism=Citrus clementina; type=EST; length=502bpback to top |