CX294126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_XANC5 (Asparaginyl-tRNA synthetase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 49/83 (59.04%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V DP YPI +T EFLR+ RPRTN AV RIRN LA A H F + GF +I TPIITTSD EGAG+MF+V+TL Sbjct: 98 VGWVEDPLTYPIQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTL 180
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_XANAC (Asparaginyl-tRNA synthetase OS=Xanthomonas axonopodis pv. citri GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 49/83 (59.04%), Postives = 56/83 (67.47%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V DP YPI +T EFLR+ RPRTN AV RIRN LA A H F + GF +I TPIITTSD EGAG+MF+V+TL Sbjct: 98 VGWVEDPLTYPIQPKPMTPEFLREVAHLRPRTNLFGAVTRIRNCLAQAVHRFFHQNGFNWISTPIITTSDAEGAGQMFRVSTL 180
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_RHOBA (Asparaginyl-tRNA synthetase OS=Rhodopirellula baltica GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 48/98 (48.98%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 10 VGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPP 303 +G D YP+ K + + E LR+ R RTNT+ AV R+RN ++ + H F +GF Y+HTPIIT SDCEGAGEMF+VTTL LEK N P Sbjct: 127 IGWCDGETYPLQKKRHSFEKLREWSHLRARTNTLGAVMRVRNRISQSIHRFFDDEGFNYLHTPIITASDCEGAGEMFRVTTL-----NLEKLAGSNRP 219
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_COLP3 (Asparaginyl-tRNA synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=asnS PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.423e-19 Identity = 43/78 (55.13%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++EFLR++ RPRTN AV R+RN LA A H FL +G+ +I TP+IT SDCEGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEFLREQAHLRPRTNIGGAVTRVRNCLAQAVHRFLHSKGYFWISTPLITGSDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_VIBVY (Asparaginyl-tRNA synthetase OS=Vibrio vulnificus (strain YJ016) GN=asnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 44/83 (53.01%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 10 VGMVDPAK-YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V+ A YP+ KT+ ++E+LR+ RPRTN I AVAR+R++L+ A H F +QG+ ++ P+IT SDCEGAGEMF+V+TL Sbjct: 100 VGWVEDADTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_VIBVU (Asparaginyl-tRNA synthetase OS=Vibrio vulnificus GN=asnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 44/83 (53.01%), Postives = 62/83 (74.70%), Query Frame = 1 Query: 10 VGMVDPAK-YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V+ A YP+ KT+ ++E+LR+ RPRTN I AVAR+R++L+ A H F +QG+ ++ P+IT SDCEGAGEMF+V+TL Sbjct: 100 VGWVEDADTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRHSLSQAIHRFYHEQGYYWLSAPLITASDCEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_VIBCH (Asparaginyl-tRNA synthetase OS=Vibrio cholerae GN=asnS PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 10 VGMVDPAK-YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 VG V+ A YP+ KT+ ++E+LR+ RPRTN I AVAR+RN LA A H F +QG+ ++ P+IT SD EGAGEMF+V+TL Sbjct: 100 VGWVEDADTYPMAKTRHSIEYLREVAHLRPRTNVIGAVARVRNCLAQAIHRFYHEQGYFWVSAPLITASDAEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_PELPD (Asparaginyl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=asnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKELIKNPPPSEADIEAAKLVVKEKGEAVAKL 372 YP+ K + + E+LR+ RPR+NT AV R+R+ LA A H F FLY+HTPIIT SDCEGAGE+F+VTTL D L++ P D K + G+ +L Sbjct: 103 YPLQKKRHSFEYLREIAHLRPRSNTFGAVFRLRSRLAQAIHRFFGDNNFLYVHTPIITASDCEGAGELFRVTTL----DAASPPLLEGRPDFGQDFFGQKTGLTVSGQLEGEL 211
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_CLOBL (Asparaginyl-tRNA synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=asnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 YP+ K + T E+LR RPR+N +AV R+R+ AYA H F Q++GF+Y +TPIIT SDCEGAGEMFQ+TT+ Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTM 179
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_CLOBH (Asparaginyl-tRNA synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=asnS PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.231e-18 Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 1 Query: 34 YPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 YP+ K + T E+LR RPR+N +AV R+R+ AYA H F Q++GF+Y +TPIIT SDCEGAGEMFQ+TT+ Sbjct: 106 YPLQKKRHTFEYLRTIAHLRPRSNAFSAVFRVRSLAAYAVHKFFQERGFVYTNTPIITGSDCEGAGEMFQLTTM 179 The following BLAST results are available for this feature:
BLAST of CX294126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294126 ID=CX294126; Name=CX294126; organism=Citrus clementina; type=EST; length=502bpback to top |