CX294126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SALTY (Asparaginyl-tRNA synthetase OS=Salmonella typhimurium GN=asnS PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SALTI (Asparaginyl-tRNA synthetase OS=Salmonella typhi GN=asnS PE=3 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SALPA (Asparaginyl-tRNA synthetase OS=Salmonella paratyphi A GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_SALCH (Asparaginyl-tRNA synthetase OS=Salmonella choleraesuis GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFDEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_PASMU (Asparaginyl-tRNA synthetase OS=Pasteurella multocida GN=asnS PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKE 285 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL D + L ++ Sbjct: 106 DPETYPMAAKRHSIEYLREVAHLRPRTNIIGAVARVRHCLAQAIHRFFHEQGFYWVATPLITASDTEGAGEMFRVSTL--DLENLPRD 191
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_MANSM (Asparaginyl-tRNA synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 10 VGMV-DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTLISDADKLEKE 285 VG V DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL D + L ++ Sbjct: 101 VGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNIIGAVARVRHCLAQAIHRFFNEQGFYWVATPLITASDTEGAGEMFRVSTL--DLENLPRD 191
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_KLEP7 (Asparaginyl-tRNA synthetase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECOUT (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain UTI89 / UPEC) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECOLI (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain K12) GN=asnS PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182
BLAST of CX294126 vs. ExPASy Swiss-Prot
Match: SYN_ECOLC (Asparaginyl-tRNA synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=asnS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 4.677e-18 Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1 Query: 22 DPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFLYIHTPIITTSDCEGAGEMFQVTTL 255 DP YP+ + ++E+LR+ RPRTN I AVAR+R+ LA A H F +QGF ++ TP+IT SD EGAGEMF+V+TL Sbjct: 105 DPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWVSTPLITASDTEGAGEMFRVSTL 182 The following BLAST results are available for this feature:
BLAST of CX294126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294126 ID=CX294126; Name=CX294126; organism=Citrus clementina; type=EST; length=502bpback to top |