CX294136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294136 vs. ExPASy Swiss-Prot
Match: RL14_SCHPO (60S ribosomal protein L14 OS=Schizosaccharomyces pombe GN=rpl14 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.828e-20 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 85 FKRYVEIGRVALVNYGKDYGKLVVIVDVLDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDINRVPRKKSLIEAMEKADVKNKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKGGLVRQELAK 459 FKRYVE+GRV LV G+ GKL VIVD++D RAL+D+P + R + + + LT I + + R R + + + DV NKW +S+W +KL +K R+ LNDFDRF +M K ++ V +AK Sbjct: 4 FKRYVEVGRVVLVTKGEYTGKLAVIVDIVDHKRALIDSPCSEFPRQVIRYGSVVLTHIVMKLPRGARSGIVAKKWKAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVMRLKKQRREQVNVAVAK 130
BLAST of CX294136 vs. ExPASy Swiss-Prot
Match: RL14_DROME (60S ribosomal protein L14 OS=Drosophila melanogaster GN=RpL14 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.515e-18 Identity = 54/142 (38.03%), Postives = 79/142 (55.63%), Query Frame = 1 Query: 79 MPFKRYVEIGRVALVNYGKDYGKLVVIVDVLDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDINRVPRKKSLIEAMEKADVKNKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKGGLVRQELAKLKRENAA*NFSRV 498 MPF+R+V+ GR+A + G G+LV IVDV+DQNR LVD P + R + L LT +I + + +A ++D+K +W+ S W K +R++LNDFDRFKL AK ++ L+ LK+ A RV Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKADGTPRV 142
BLAST of CX294136 vs. ExPASy Swiss-Prot
Match: RL14B_YEAST (60S ribosomal protein L14-B OS=Saccharomyces cerevisiae GN=RPL14B PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 7.701e-18 Identity = 47/125 (37.60%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 91 RYVEIGRVALVNYGKDYGKLVVIVDVLDQNRALVDAPD--MVRSQMNFKRLSLTDIKIDINRVPRKKSLIEAMEKADVKNKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKGGLVRQELAK 459 R VE+GRV L+ G+ GKL IV+++DQ + L+D P + R +N ++ LT + + R R ++ + A V KW SSW +K+ ++RRAAL DF+RF++M+ + +K V++ LAK Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137
BLAST of CX294136 vs. ExPASy Swiss-Prot
Match: RL14A_YEAST (60S ribosomal protein L14-A OS=Saccharomyces cerevisiae GN=RPL14A PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.006e-17 Identity = 47/125 (37.60%), Postives = 76/125 (60.80%), Query Frame = 1 Query: 91 RYVEIGRVALVNYGKDYGKLVVIVDVLDQNRALVDAPD--MVRSQMNFKRLSLTDIKIDINRVPRKKSLIEAMEKADVKNKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKGGLVRQELAK 459 R VE+GRV L+ G+ GKL IV+++DQ + L+D P + R +N ++ LT + + R R ++ + A V KW SSW +K+ ++RRAAL DF+RF++M+ + +K V++ LAK Sbjct: 13 RLVEVGRVVLIKKGQSAGKLAAIVEIIDQKKVLIDGPKAGVPRQAINLGQVVLTPLTFALPRGARTATVSKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137
BLAST of CX294136 vs. ExPASy Swiss-Prot
Match: RL14_DICDI (60S ribosomal protein L14 OS=Dictyostelium discoideum GN=rpl14 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.314e-17 Identity = 53/128 (41.41%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 85 FKRYVEIGRVALVNYGKDYGKLVVIVDVLDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDINRVPRKKSLIEAMEKADVKNKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKGGLVRQELAKL 462 F +VEIGRV ++NYG+ K VI+DVLDQNRALV P + R +NFK ++LT +K++I R R +LI A++ AD++ K S +K+ + ++ DF+RFK L + K V E+ KL Sbjct: 5 FSLFVEIGRVVVINYGEYINKTAVIIDVLDQNRALVAGPHSGVERHIINFKWINLTPLKVNIQRGARINTLIAAIKAADLETKIAALSAVKKINARATKSNQTDFERFKANLIRRKLNKKVSGEVKKL 132
BLAST of CX294136 vs. ExPASy Swiss-Prot
Match: RL14_DROVI (60S ribosomal protein L14 OS=Drosophila virilis GN=RpL14 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.991e-17 Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 1 Query: 79 MPFKRYVEIGRVALVNYGKDYGKLVVIVDVLDQNRALVDAP--DMVRSQMNFKRLSLTDIKIDINRVPRKKSLIEAMEKADVKNKWENSSWGRKLIVQKRRAALNDFDRFKLMLAKIKKGGLVRQELAKLKRENAA*NFSRV 498 MPF+R+V+ GR+A + G G+LV IVDV+DQNR LVD P + R + L LT +I + + +A +D+K +W+ S W K +R+ LNDFDRFKL AK ++ L+ LK+ + R+ Sbjct: 1 MPFERFVQTGRIAKASAGPLKGRLVAIVDVIDQNRVLVDGPLTGVPRQEYRLNNLHLTKYRIKFPYTAPTRIVRKAWVDSDLKAQWKVSPWSVKAQNICKRSQLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRTKSDGTPRI 142 The following BLAST results are available for this feature:
BLAST of CX294136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294136 ID=CX294136; Name=CX294136; organism=Citrus clementina; type=EST; length=556bpback to top |