CX294310

Overview
NameCX294310
Unique NameCX294310
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length564
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1895 contig Ccv1_Contig1895:18..581. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294310 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.952e-20
Identity = 62/146 (42.47%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  104 SDALYQYILETSVYPREAESMKELRELTAKHPWN-VMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYL 538
            S AL  Y    SV  RE   ++EL ++TA+ P    M    +E QFL +L++LV A+  +EIG +TGYS L  A ALP  G+I+  DI+ +   +G P  Q+AGV   ID R G A   L  L ++    G+FD +FVDADK  YL
Sbjct:    8 SPALLDYA--RSVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYL 150          
BLAST of CX294310 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.103e-19
Identity = 52/130 (40.00%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  167 KELRELTAKH-PWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLTTQEV 553
            KEL + T ++   ++M T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ E  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y T  E+
Sbjct:   36 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYEL 164          
BLAST of CX294310 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.458e-19
Identity = 51/130 (39.23%), Postives = 83/130 (63.85%), Query Frame = 2
Query:  167 KELRELTAKH-PWNVMTTSADEGQFLNMLLKLVNAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDLLIQDEKNHGSFDFIFVDADKDNYLTTQEV 553
            KEL + T ++   ++M T A++  F  +L++++NAK T++IGV+TG S L  ALA+ D+G+++A D++ +  +  L    KAGV HKI+ +  PA   L  LI D+    ++DF+F+DADK  Y T  E+
Sbjct:   35 KELIQFTKENIERHIMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYEL 163          
The following BLAST results are available for this feature:
BLAST of CX294310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY4.952e-2042.47O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI1.103e-1940.00Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI2.458e-1939.23Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionC05015A05SK FlavSen1 Citrus clementina cDNA clone C05015A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294310 ID=CX294310; Name=CX294310; organism=Citrus clementina; type=EST; length=564bp
TTCGGCACGAGGGAAAAGACTTGCCTCAATGGCTTCCAACGCAGAAGATC
AACAAAACCAACAAGGCGGACACAAGGAAGTTGGCCACAAGAGCCTGCTC
CAATCCGATGCCCTCTACCAGTATATTCTTGAAACCAGTGTGTACCCAAG
AGAGGCTGAATCAATGAAGGAGCTTAGAGAATTGACTGCCAAACATCCAT
GGAACGTTATGACAACGTCGGCAGACGAAGGGCAGTTCTTGAACATGCTG
TTGAAGCTGGTCAATGCAAAGAACACAATGGAGATTGGAGTCTACACAGG
CTACTCTCTTTTGGCCACTGCCCTTGCCCTTCCTGATGACGGAAAGATTT
TGGCCATGGACATCAACAGAGAAAATTATGAATTGGGGCTGCCAGTTATC
CAAAAAGCTGGTGTTGCTCACAAGATTGACTTCAGAGAAGGCCCTGCCCT
GCCTGTTCTTGACCTACTGATCCAAGATGAGAAGAACCATGGGTCCTTTG
ACTTCATATTTGTGGACGCTGATAAGGACAACTACCTAACTACCCAAGAG
GTTGGTTGAGTTGG
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