CX294315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_PORPU (ATP synthase subunit c, chloroplastic OS=Porphyra purpurea GN=atpH PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.253e-14 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ ++SAASVIAAGLAVGLA+I IARQPE EGKIRGTLLLSLAFME+LT G Sbjct: 1 MDSIVSAASVIAAGLAVGLAAIGPGIGQGSAAANAVEGIARQPEVEGKIRGTLLLSLAFMESLTIYG 67 HSP 2 Score: 21.9422 bits (45), Expect = 3.253e-14 Identity = 12/21 (57.14%), Postives = 13/21 (61.90%), Query Frame = 1 Query: 493 FYGSFNIYGLVVALH-FFCDP 552 F S IYGLVVAL F +P Sbjct: 59 FMESLTIYGLVVALSLLFANP 79
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_THEEB (ATP synthase subunit c OS=Thermosynechococcus elongatus (strain BP-1) GN=atpE PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 4.674e-14 Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLI++ASV+AA LA+GLAS+ IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MNPLIASASVLAAALAIGLASLGPGLAQGNASGQALEGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_SYNSC (ATP synthase subunit c OS=Synechococcus sp. (strain CC9605) GN=atpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.496e-14 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ + SAASV+AAGLAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MDSITSAASVVAAGLAVGLAAIGPGIGQGTASGGAVEGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67 HSP 2 Score: 21.557 bits (44), Expect = 5.496e-14 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F S IYGLVVAL Sbjct: 59 FMESLTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_SYNS9 (ATP synthase subunit c OS=Synechococcus sp. (strain CC9902) GN=atpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.496e-14 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ + SAASV+AAGLAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MDSITSAASVVAAGLAVGLAAIGPGIGQGTASGGAVEGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67 HSP 2 Score: 21.557 bits (44), Expect = 5.496e-14 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F S IYGLVVAL Sbjct: 59 FMESLTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_SYNS3 (ATP synthase subunit c OS=Synechococcus sp. (strain CC9311) GN=atpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.496e-14 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ + SAASV+AAGLAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MDSITSAASVVAAGLAVGLAAIGPGIGQGSASQGAVEGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67 HSP 2 Score: 21.557 bits (44), Expect = 5.496e-14 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F S IYGLVVAL Sbjct: 59 FMESLTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_SYNR3 (ATP synthase subunit c OS=Synechococcus sp. (strain RCC307) GN=atpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.496e-14 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ + SAASV+AAGLAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MDSITSAASVVAAGLAVGLAAIGPGIGQGTASGGAVEGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67 HSP 2 Score: 21.557 bits (44), Expect = 5.496e-14 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F S IYGLVVAL Sbjct: 59 FMESLTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_SYNPX (ATP synthase subunit c OS=Synechococcus sp. (strain WH8102) GN=atpE PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.496e-14 Identity = 42/67 (62.69%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ + SAASV+AAGLAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MDSITSAASVVAAGLAVGLAAIGPGIGQGTASGGAVEGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67 HSP 2 Score: 21.557 bits (44), Expect = 5.496e-14 Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F S IYGLVVAL Sbjct: 59 FMESLTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_CYAP8 (ATP synthase subunit c OS=Cyanothece sp. (strain PCC 8801) GN=atpE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.104e-14 Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNP ++AASVIAA LAVGLA+I IARQPEAEGKIRGTLLLSLAFME+LT G Sbjct: 1 MNPTVAAASVIAAALAVGLAAIGPGFGQGNASGEAVSGIARQPEAEGKIRGTLLLSLAFMESLTIYG 67
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_THAPS (ATP synthase subunit c, chloroplastic OS=Thalassiosira pseudonana GN=atpH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.143e-14 Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+ +ISAASVIAAGLA+GLA+I IARQPEAE KIRGTLLLSLAFMEALT G Sbjct: 1 MDSIISAASVIAAGLAIGLAAIGPGIGQGNAAGQAVEGIARQPEAENKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 7.143e-14 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPL_TRIEI (ATP synthase subunit c OS=Trichodesmium erythraeum (strain IMS101) GN=atpE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.972e-14 Identity = 43/67 (64.18%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 M+PLI+AASV+AA LAVGL +I IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MDPLIAAASVVAAALAVGLGAIGPGIGQGNAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 The following BLAST results are available for this feature:
BLAST of CX294315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294315 ID=CX294315; Name=CX294315; organism=Citrus clementina; type=EST; length=601bpback to top |