CX294315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_CHLSC (ATP synthase subunit c, chloroplastic OS=Chloranthus spicatus GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_CARPA (ATP synthase subunit c, chloroplastic OS=Carica papaya GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_CALFG (ATP synthase subunit c, chloroplastic OS=Calycanthus floridus var. glaucus GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_BUXMI (ATP synthase subunit c, chloroplastic OS=Buxus microphylla GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_BARVE (ATP synthase subunit c, chloroplastic OS=Barbarea verna GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_ANTFO (ATP synthase subunit c, chloroplastic OS=Anthoceros formosae GN=atpH PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_ANGEV (ATP synthase subunit c, chloroplastic OS=Angiopteris evecta GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_AMBTC (ATP synthase subunit c, chloroplastic OS=Amborella trichopoda GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_AETGR (ATP synthase subunit c, chloroplastic OS=Aethionema grandiflora GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72
BLAST of CX294315 vs. ExPASy Swiss-Prot
Match: ATPH_AETCO (ATP synthase subunit c, chloroplastic OS=Aethionema cordifolium GN=atpH PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.011e-16 Identity = 49/67 (73.13%), Postives = 49/67 (73.13%), Query Frame = 2 Query: 320 MNPLISAASVIAAGLAVGLASIXXXXXXXXXXXXXXXXIARQPEAEGKIRGTLLLSLAFMEALTFMG 520 MNPLISAASVIAAGLAVGLASI IARQPEAEGKIRGTLLLSLAFMEALT G Sbjct: 1 MNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYG 67 HSP 2 Score: 20.4014 bits (41), Expect = 1.011e-16 Identity = 9/14 (64.29%), Postives = 10/14 (71.43%), Query Frame = 1 Query: 493 FYGSFNIYGLVVAL 534 F + IYGLVVAL Sbjct: 59 FMEALTIYGLVVAL 72 The following BLAST results are available for this feature:
BLAST of CX294315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 173
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294315 ID=CX294315; Name=CX294315; organism=Citrus clementina; type=EST; length=601bpback to top |