CX294316

Overview
NameCX294316
Unique NameCX294316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length508
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9261 contig Ccv1_Contig9261:21..530. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX294316 vs. ExPASy Swiss-Prot
Match: CYB5_MORAP (Cytochrome b5 OS=Mortierella alpina PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.324e-11
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 2 
Query:  230 EVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGH 388
            +++ H      +L I GKVYD + F+D+HPGG+EVLI   G+DAT  FEDVGH
Sbjct:   11 DLSQHTTKDSLYLAIHGKVYDCTGFIDEHPGGEEVLIDEAGRDATESFEDVGH 63
The following BLAST results are available for this feature:
BLAST of CX294316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CYB5_MORAP7.324e-1152.83Cytochrome b5 OS=Mortierella alpina PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05015A12SK FlavSen1 Citrus clementina cDNA clone C05015A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294316 ID=CX294316; Name=CX294316; organism=Citrus clementina; type=EST; length=508bp
ATTCCTCACTTTGTTTGATTTCAAAATCTACTTCTTTAGAGTTTAAACAT
AAAAGGGTTTCTTTATTTGCTGTTGTTTTGATCAAAAAGTTCCCTTTTTG
GTTGGTGTTTGGGTCGATTCTACATTTTTACTTTATTTTTTTGTGGGGTT
TTTTTGAATTTGTTGAGGTTTTGTGTTTAGCTGCAGTAGTGAACAAATGG
CCTCAGATCCAAAGATTCACCAGTTCGAAGAGGTCGCCACGCACAACAAA
ACTAAGGATTGCTGGCTTATTATTTCTGGCAAGGTGTATGATGTGTCCTC
GTTCATGGATGATCACCCTGGAGGAGATGAGGTTTTGATTTCTGCAACTG
GGAAAGATGCAACAAATGACTTTGAAGATGTGGGTCACTGACTCCGCTAG
GGAGATGATGGACAAGTACTATATTGGTGACATTGATCCCTCAACTGTTC
CTCGGAAACGTGCATATATTCCACTGGAGCAACCTGCTTACAATCAAGAC
AAGACCCC
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