CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_PONAB (60S ribosomal protein L23 OS=Pongo abelii GN=RPL23 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 7.220e-56 Identity = 107/139 (76.98%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 MSKRGRGGS+G KFR+SLGLPV A +NCAD+TGAKNLYIISVKGIKG+LNRLP+A VGDMVMATV V PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGQLNRLPAAGVGDMVMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_AEDAE (60S ribosomal protein L23 OS=Aedes aegypti GN=RpL23-A PE=2 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.231e-55 Identity = 104/139 (74.82%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 MSKRGRGGSAG KFR+SLGLPV A +NCAD+TGAKNLY+I+V GI+GRLNRLP+A VGDM +ATV VMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 1 MSKRGRGGSAGGKFRISLGLPVGAVINCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNAGSI 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_CANFA (60S ribosomal protein L23 OS=Canis familiaris GN=RPL23 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.608e-55 Identity = 108/139 (77.70%), Postives = 119/139 (85.61%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 MSKRGRGGS+G KFR+SLGLPV A +NCAD+TGAKNLYIISVKGIKGRLNRLP+A VGDMVMATV X V PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWP IAS A +I Sbjct: 1 MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDMVMATVKKGKPXLRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVXKECADLWPXIASNAGSI 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_DROME (60S ribosomal protein L23 OS=Drosophila melanogaster GN=RpL23 PE=1 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 4.680e-55 Identity = 103/139 (74.10%), Postives = 120/139 (86.33%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 MSKRGRGG+AG KFR+SLGLPV A +NCAD+TGAKNLY+I+V GI+GRLNRLP+A VGDM +ATV VMPAV++RQRKP+RR+DGVF+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A++I Sbjct: 1 MSKRGRGGTAGGKFRISLGLPVGAVMNCADNTGAKNLYVIAVHGIRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIASNASSI 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_SCHPO (60S ribosomal protein L23 OS=Schizosaccharomyces pombe GN=rpl23a PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.409e-51 Identity = 95/137 (69.34%), Postives = 112/137 (81.75%), Query Frame = 1 Query: 22 RGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 RGRG ++G K+RM+LGLPV A +NCAD++GAKNLYI+SV G RLNRLP+A GDMV+ATV +MPA++VRQRK WRRKDGV++YFEDNAGVIVNPKGEMKGSAITGP+ KECADLWPRIAS A +V Sbjct: 3 RGRGAASGTKYRMTLGLPVQAIMNCADNSGAKNLYIVSVFGTGARLNRLPAASCGDMVLATVKKGKPDLRKKIMPAIVVRQRKAWRRKDGVYLYFEDNAGVIVNPKGEMKGSAITGPVAKECADLWPRIASNAGTVV 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_CAEEL (60S ribosomal protein L23 OS=Caenorhabditis elegans GN=rpl-23 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.035e-50 Identity = 96/139 (69.06%), Postives = 114/139 (82.01%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 MSKRGRGG++G KFR+SLGLPV A +NCAD+TGAKNL++ISV GI+GRLNRLPSA VGDM + +V V+ V++RQRK +RRKDG F+YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIA+ A +I Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVISVYGIRGRLNRLPSAGVGDMFVCSVKKGKPELRKKVLQGVVIRQRKQFRRKDGTFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPRIAANAGSI 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_YEAST (60S ribosomal protein L23 OS=Saccharomyces cerevisiae GN=RPL23A PE=1 SV=3) HSP 1 Score: 196.438 bits (498), Expect = 7.731e-50 Identity = 92/133 (69.17%), Postives = 109/133 (81.95%), Query Frame = 1 Query: 34 GSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G+ G KFR+SLGLPV A +NCAD++GA+NLYII+VKG RLNRLP+A +GDMVMATV VMPA++VRQ K WRR+DGVF+YFEDNAGVI NPKGEMKGSAITGP+GKECADLWPR+AS + +V Sbjct: 5 GAQGTKFRISLGLPVGAIMNCADNSGARNLYIIAVKGSGSRLNRLPAASLGDMVMATVKKGKPELRKKVMPAIVVRQAKSWRRRDGVFLYFEDNAGVIANPKGEMKGSAITGPVGKECADLWPRVASNSGVVV 137
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_BRUMA (60S ribosomal protein L23 OS=Brugia malayi GN=RPL23 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 7.731e-50 Identity = 98/139 (70.50%), Postives = 114/139 (82.01%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 MSKRGRGG++G KFR+SLGLPV A +NCAD+TGAKNL++I+V GIKGRLNRLPSA VGDM +A+V V+ AV+VRQRK +RR DG +YFEDNAGVIVN KGEMKGSAITGP+ KECADLWPRIAS A +I Sbjct: 1 MSKRGRGGASGAKFRISLGLPVGAVMNCADNTGAKNLFVIAVSGIKGRLNRLPSAGVGDMFVASVKKGKPELRKKVLQAVVVRQRKQYRRIDGSSIYFEDNAGVIVNNKGEMKGSAITGPVTKECADLWPRIASNAGSI 139
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_DICDI (60S ribosomal protein L23 OS=Dictyostelium discoideum GN=rpl23 PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 5.367e-43 Identity = 83/132 (62.88%), Postives = 105/132 (79.55%), Query Frame = 1 Query: 37 SAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 + G+ +R+SLGLPV A +N AD++GAKNLY+I+VKGIKGRLNRLPSA VGDMVMATV V ++VRQRK W+RKDGV++YFEDNAGV+ NPKGE+KG+ I GP+ KEC+DLWP++A+ A IV Sbjct: 6 AVGSNYRVSLGLPVGAVMNSADNSGAKNLYVIAVKGIKGRLNRLPSAGVGDMVMATVKKGKPELRKKVCTGLVVRQRKHWKRKDGVYIYFEDNAGVMCNPKGEVKGN-ILGPVAKECSDLWPKVATNAGTIV 136
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_TRYCR (60S ribosomal protein L23 OS=Trypanosoma cruzi GN=RPL23 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.415e-35 Identity = 80/132 (60.61%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKG-EMKGSAITGPIGKECA-DLWPRIASAANAIV 432 G +FR+SL LPV A VNCAD+TGAKNLYIISVKG GRLNRLP+A +GD+VMA+V V+ AVI+RQRK WRRKDG +YFEDNAGVIVN +G + + S I GP+ KE P+I+S A AIV Sbjct: 10 GCRFRVSLALPVGAVVNCADNTGAKNLYIISVKGYHGRLNRLPAAALGDIVMASVKKGKPELRRKVLNAVIIRQRKSWRRKDGTVIYFEDNAGVIVNSQGRDGRVSGIAGPVAKEAGRPSGPKISSHAPAIV 141 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |