CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_FUSNN (50S ribosomal protein L14 OS=Fusobacterium nucleatum subsp. nucleatum GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 88 VNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXX---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKE 384 +N AD++GAK L +I V G G R +GD+V+A+V ++ AVIVR RK RR DG ++ F+DNAGV++N E + + I GP+ +E Sbjct: 8 LNVADNSGAKKLMVIRVLG--GSRKRFGK--IGDIVVASVKEAIPGGNVKKGDIVKAVIVRTRKETRRDDGSYIKFDDNAGVVINNNNEPRATRIFGPVARE 105
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_CYAP4 (50S ribosomal protein L14 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 88 VNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXX---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 393 +N AD++GAK L I V G G R S VGD+++ATV V+ AVIVR RK RR+ G+ + F+DNA V++N G KG+ + GP+ +E D Sbjct: 8 LNVADNSGAKKLLCIRVLG--GGNRRYGS--VGDVIIATVKDATPNMPVKKSDVVRAVIVRTRKAIRRESGMSIRFDDNAAVLINQDGNPKGTRVFGPVARELRD 108
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_BRAHW (50S ribosomal protein L14 OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=rplN PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.239e-11 Identity = 45/125 (36.00%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXX---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 432 + V +T+N AD+TG K L I V G +R A +GD+++ +V V+ AVIVR +K RR DG ++ F++NA VIV+ K E +G I GP+ +E D + +I S A ++ Sbjct: 2 IQVPSTLNVADNTGVKKLKCIKVLGG----SRRRYATLGDVIICSVTDIIPTCSIEKGKVVKAVIVRVKKEVRRPDGSYIRFDENAAVIVDDKKEPRGKRIFGPVARELRDRGFMKIVSLAPEVI 122 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |