CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_STAMF (50S ribosomal protein L14P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.804e-30 Identity = 67/140 (47.86%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M K+G+G A ++ R++ GL V + V AD++GAK + II V G KGRL R+P A +GD+V+ TV V+ AVIVRQ++P+RR DG ++ FEDNA IV P+G KGS I GPI KE A+ WP++A+ A +V Sbjct: 1 MPKKGKGKPAFSRRRIATGLQVGSYVRVADNSGAKLVKIIGVPGYKGRLRRIPPAGIGDLVVVTVKKGTPEMRKQVVKAVIVRQKRPFRRPDGTWVAFEDNAVAIVTPEGTPKGSEIRGPIAKEVAERWPQLANIATIVV 140
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_THEAC (50S ribosomal protein L14P OS=Thermoplasma acidophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.161e-29 Identity = 60/126 (47.62%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 55 RMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 R + GLP+ A + CAD+TGA+++ +I VK G+ R+P+A VGDM MA+V V+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ A+ IV Sbjct: 7 RQTRGLPLGANITCADNTGARSISLIDVKAWHGKARRIPAAGVGDMFMASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVQFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAIASIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_THEVO (50S ribosomal protein L14P OS=Thermoplasma volcanium GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.377e-29 Identity = 62/133 (46.62%), Postives = 90/133 (67.67%), Query Frame = 1 Query: 34 GSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G AG + R GLP+ A + CAD+TGA+++ +I VK G+ R+P+A VGDM +A+V V+ AV++RQ++P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ A+ IV Sbjct: 3 GIAGREIR---GLPLGANIVCADNTGARSISLIDVKAYHGKARRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVIRQKRPYRRPDGTMVEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAIASIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_AERPE (50S ribosomal protein L14P OS=Aeropyrum pernix GN=rpl14p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 5.760e-29 Identity = 66/140 (47.14%), Postives = 93/140 (66.43%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+K+ + G +++ ++ GL V + V AD++GAK + IISV +K RL RLPSA VGD+V+ +V V+ AV+VRQR+P+RR DG ++ FEDNA VIVNP G +GS + GPI +E A+ WPR+A A IV Sbjct: 1 MAKKKKYGVVVSRYGVNTGLQVGSYVPVADNSGAKEVMIISVPQVKTRLRRLPSAGVGDLVVVSVKKGTPQMRRQVVYAVVVRQRRPFRRPDGTWVSFEDNAVVIVNPDGTPRGSEVRGPIAREAAERWPRVAKIATMIV 140
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_HYPBU (50S ribosomal protein L14P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl14p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.826e-29 Identity = 64/137 (46.72%), Postives = 90/137 (65.69%), Query Frame = 1 Query: 22 RGRGGSAGNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 +G G AG + ++ GL V + V AD++GAK II V G KGRL R+P A VGDMV+ TV V+ A+++RQR+P+RR DG ++ FEDNA VIV+P G KGS I GP+ +E A+ WP++A+ A+ I+ Sbjct: 3 KGAAG-AGPRRHIAAGLQVGSYVKVADNSGAKEAMIIGVIGYKGRLRRIPPAAVGDMVVVTVKKGTPEMRKQVVRAIVIRQRRPYRRPDGTWIAFEDNAVVIVSPDGTPKGSEIRGPVAREAAERWPKVANIASIII 138
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METTH (50S ribosomal protein L14P OS=Methanobacterium thermoautotrophicum GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.676e-28 Identity = 64/126 (50.79%), Postives = 86/126 (68.25%), Query Frame = 1 Query: 55 RMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 +++ LPV A + C D+TGA+ + IISV+G KG RL +A VGDMV+ +V V+ AVIVRQ+K +RR DG+ + FEDNA VIV+P+G +KGS I GP+ KE AD WP + SAA+ IV Sbjct: 7 KVTRALPVGARLQCVDNTGAREVEIISVRGYKGVRRRLAAAGVGDMVVVSVKKGTVDMRREVLNAVIVRQKKEYRRPDGLRVKFEDNAAVIVSPEGVLKGSEIRGPVAKEAADRWPSVGSAASIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METKA (50S ribosomal protein L14P OS=Methanopyrus kandleri GN=rpl14p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.676e-28 Identity = 66/121 (54.55%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 LPV A + CAD+TGA+ L II+VKG KG RLP+A +GDMV+ +V V+ AVIVRQRK +RR DG + FEDNA VIV P G +GS I GP+ KE A+ WPRI S A+ IV Sbjct: 13 LPVGARLVCADNTGARELQIIAVKGYKGVRRRLPNAGIGDMVVCSVKEGTPDMRKEVVNAVIVRQRKEYRRPDGTRVKFEDNAAVIVTPDGAPRGSEIRGPVAKEAAERWPRIGSIASIIV 133
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METST (50S ribosomal protein L14P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl14p PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.859e-28 Identity = 66/125 (52.80%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 58 MSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 +S LP+ A + C D+TGA+ + IISVKG KG RL SA VGDMV+ +V V AV+VRQ+K +RR DG+ + FEDNA VI+ G +KGS I GPI KE ADLWP I SAA+ IV Sbjct: 8 VSKSLPIGARLKCIDNTGAREVEIISVKGFKGVRRRLASAGVGDMVVISVKKGTADMRREVTTAVVVRQKKEYRRADGLRVKFEDNAAVIITEDGVLKGSEIRGPIAKEAADLWPAIGSAASIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL23_ENCCU (60S ribosomal protein L23 OS=Encephalitozoon cuniculi GN=RPL23 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.369e-28 Identity = 57/127 (44.88%), Postives = 87/127 (68.50%), Query Frame = 1 Query: 49 KFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 +++M+ G+ V + CAD++GAK L I VK +GRLNRLP+A GD+ + +V V A+++RQ+K WRR DG + FEDNA V++N KGE++G+ I GP+ +E AD+WP+I+S A++I Sbjct: 19 RYKMTRGIQVETLMKCADNSGAKILRCIGVKRYRGRLNRLPAAAPGDICVVSVKKGKPELRKKVHYAILIRQKKIWRRTDGSHIMFEDNAAVLINNKGELRGAQIAGPVPREVADMWPKISSQASSI 145
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 6.369e-28 Identity = 60/125 (48.00%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 58 MSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 +S LP+ AT+ C D+TGA+ + IISVKG KG RL A VGD+V+A+V V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE AD WP + SAA+ +V Sbjct: 8 VSKALPIGATLQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWPSVGSAASILV 132 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |