CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PICTO (50S ribosomal protein L14P OS=Picrophilus torridus GN=rpl14p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.420e-27 Identity = 59/126 (46.83%), Postives = 84/126 (66.67%), Query Frame = 1 Query: 55 RMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 R + GLP+ A + C D+TGAK + +I VK + R+P+A VGDM +A+V V+ AV+VRQR+P+RR DG + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ ++ IV Sbjct: 7 RETRGLPLGALIPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAISSTIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METJA (50S ribosomal protein L14P OS=Methanocaldococcus jannaschii GN=rpl14p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.676e-26 Identity = 63/121 (52.07%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 LPV A CAD+TGAK + II+V+ KG RLP+A VGDMV+ TV V+PAV++RQRK RR DG + F DNA VIV P G KGS I GP+ KE A+ WP IA A I+ Sbjct: 12 LPVGARCICADNTGAKEVEIIAVRNYKGVARRLPTARVGDMVIVTVKKGTPEMRKQVLPAVVIRQRKEIRRPDGTRVKFADNAVVIVTPDGNPKGSDIKGPVAKEAAERWPGIARIAKIII 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_KORCO (50S ribosomal protein L14P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl14p PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.961e-26 Identity = 60/130 (46.15%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G K +++ GLPV A + CAD+TGAK L II V G KGR +R+P+A VGDMV V A++VRQR P+RRK+G ++ FEDNA V+VN G +GS GPI KE + WP ++ + +V Sbjct: 12 GVKPKITHGLPVRARLKCADNTGAKLLMIIGVHGYKGRKDRVPTASVGDMVTVVVKRGKYDLMHKPFKAIVVRQRMPYRRKNGQWVVFEDNAAVLVNDDGTPRGSEFRGPIAKEAIERWPSLSVISAQVV 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_CENSY (50S ribosomal protein L14P OS=Cenarchaeum symbiosum GN=rpl14p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.017e-25 Identity = 65/140 (46.43%), Postives = 89/140 (63.57%), Query Frame = 1 Query: 22 RGRGGSAG-NKFR--MSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 R RG + G +FR ++ LPV A V CAD++GAK L II V+ K R++RLP+A VGD V V V AVI+RQ+ P RR +GV + FEDNA V+ P+GEMKG+ I GP+ E ++ WPR+A+ A+ +V Sbjct: 5 RSRGKAKGVEEFRPYVTRALPVGARVTCADNSGAKVLEIIMVQKAKTRVSRLPAAAVGDYVNVVVKKGPAELRKQVHGAVIIRQKYPVRRLNGVRVAFEDNAAVLTTPEGEMKGTDIKGPVAAEASEKWPRLANLASMVV 144
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRFU (50S ribosomal protein L14P OS=Pyrococcus furiosus GN=rpl14p PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.734e-25 Identity = 66/141 (46.81%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 13 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+K+G G + G + R + LPV A + AD++GAK + II V G RL SA VGDMV+ATV V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 1 MAKKGAGATRGVSAVRPTRALPVGAYLTVADNSGAKVIQIIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_SULTO (50S ribosomal protein L14P OS=Sulfolobus tokodaii GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.958e-25 Identity = 60/130 (46.15%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G++ ++ GL TV AD++GAK II + G KG L R+P A + D+VM +V AVIVRQR P+RR DG ++ FEDNA VIVNP G KG+ I GPI KE A+ WP++AS A ++ Sbjct: 12 GSRKGLTPGLQHYTTVTVADNSGAKEAVIIGIYGYKGVLRRIPFANIADLVMVSVRKGTPEVRKQKFKAVIVRQRMPFRRPDGTWIAFEDNAVVIVNPDGTPKGTEIRGPIAKEAAERWPKVASIATMVI 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_IGNH4 (50S ribosomal protein L14P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.864e-25 Identity = 61/134 (45.52%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 37 SAGNKFRMSL--GLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 ++ NK R + GL V + V D++GAK II V G GRL R+P A VGDMV+ TV V+ A++VRQRKP+RR DG ++ FEDNA VIV+ G +GS I GP+ +E + WPRI + A+ +V Sbjct: 4 ASANKSRRKVVTGLQVGSYVKVTDNSGAKVAMIIGVPGYHGRLRRIPPAGVGDMVVVTVKKGTPEMRHQVVRAIVVRQRKPFRRPDGTWVAFEDNAVVIVSEDGTPRGSEIRGPVAREAVERWPRIGNVASIVV 137
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRHO (50S ribosomal protein L14P OS=Pyrococcus horikoshii GN=rpl14p PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25 Identity = 63/141 (44.68%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 13 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+K+G G + G + R + +P+ A + AD++GAK + +I V G RL SA VGDMV+ATV V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 1 MAKKGAGATRGISPVRPTRAIPIGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRVKFEDNAAVIVTPEGVPRGTEIRGPVAREAAEKWVRIGSIASIIV 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRAB (50S ribosomal protein L14P OS=Pyrococcus abyssi GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25 Identity = 64/141 (45.39%), Postives = 87/141 (61.70%), Query Frame = 1 Query: 13 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+K+G G + G R + +PV A + AD++GAK + +I V G RL SA VGDMV+ATV V+ AVI+RQRK +RR DG+ + FEDNA VIV P+G +G+ I GP+ +E A+ W RI S A+ IV Sbjct: 1 MAKKGAGATRGITPVRPTRAIPVGAYLTVADNSGAKVIQVIGVVEYHGTRRRLASAGVGDMVVATVKKGRPDMRHQVVRAVIIRQRKEYRRLDGMRIKFEDNAAVIVTPEGVPRGTEIRGPVAREAAERWVRIGSIASIIV 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLPSA VG +V +V V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |