CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.046e-25 Identity = 57/120 (47.50%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLPSA VG +V +V V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.608e-25 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLP+ VG MV +V V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRKO (50S ribosomal protein L14P OS=Pyrococcus kodakaraensis GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.124e-24 Identity = 62/141 (43.97%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 13 MSKRGRGGSAG-NKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+K+G G + G + R + LP+ A + AD++GAK + II V G KG RL +A VGDMV+ATV V+ AV+VRQRK +RR DG+ + FEDNA IV P+G +G+ I G I +E A+ W R+ S A+ ++ Sbjct: 1 MAKKGAGATRGISPVRPTRALPIGAYLKVADNSGAKVIQIIGVVGYKGTRRRLAAAGVGDMVVATVKKGRPDMRHQVVRAVVVRQRKEYRRLDGMRVKFEDNAAAIVTPEGVPRGTEIRGAIAREAAERWVRLGSIASIVL 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.124e-24 Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L II+VK G + RLP+ VG MV +V V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.124e-24 Identity = 58/120 (48.33%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L II+VKG KG RLP+ VG +V +V V+PA+I+RQ+K +RR DG + FEDNA VIV P+G KGS I GP+ KE A+ W ++ A I Sbjct: 12 LPNGARLICADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVSRLAKII 131
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.468e-24 Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLP+ VG MV +V V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.918e-24 Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 88 VNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 VN +D++GAK IISV G +G L R+P A VGD+VM +V AV++RQR P+RR DG ++ F+DNA VIVNP G KG+ I GP+ +E A+ WP++AS A IV Sbjct: 24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METM5 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl14p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.918e-24 Identity = 56/120 (46.67%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 429 LP A + CAD+TGAK L +I+VK G + RLP+ VG MV +V V+PA+I+RQ+K ++R DG + FEDNA VIV P+G KGS I GP+ KE A+ WP ++ A I Sbjct: 12 LPNGARLVCADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.287e-24 Identity = 57/130 (43.85%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G++ ++ L + VN AD++G K II V G +G L R+P A + DMVM ++ AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E A+ WP+IAS A +V Sbjct: 9 GSRKGLTPALQHYSVVNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASLATLVV 138
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_ARCFU (50S ribosomal protein L14P OS=Archaeoglobus fulgidus GN=rpl14p PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.120e-23 Identity = 59/121 (48.76%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 LP A + CAD+TGA+ L II+VKG KG R P+A VGD+V+ TV V AVIVRQRK +RR DG + FEDNA VI N +GE +GS I G + +E A+ + +I + A+ IV Sbjct: 12 LPTGARLVCADNTGARELEIIAVKGYKGVRRRYPAAGVGDIVVVTVKKGTPEIRKQVHYAVIVRQRKEYRRPDGTRVKFEDNAAVITNERGEPRGSEIRGAVAREAAERFSKIGTIASVIV 132 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |