CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_THEPD (50S ribosomal protein L14P OS=Thermofilum pendens (strain Hrk 5) GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.616e-23 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+KRG + G +R+ L G+ + + V AD++GA +I V K R+P A VGD+V+ ++ VM A+++RQR+P+RR DG ++ FEDNA VI+ P+GE KG+ I GP+ KE A+ WP++++ A+ IV Sbjct: 1 MAKRGPK-TVGVSYRLGLTPGVFMESLVKVADNSGATLAKVIGVPHYKAVWRRIPGAAVGDIVIVSIRAGKPELRKQVMRAIVIRQRRPYRRPDGSWIAFEDNAVVIITPEGEPKGTEIRGPLAKEAAERWPKLSAMASIIV 141
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_NITMS (50S ribosomal protein L14P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.723e-23 Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 +PV A + CAD++GAK L +I+V + R +RLPSA VGD V V AVI+RQ+ P RR +GV + FEDNA V++ P+GE KG+ I GP+ E ++ WPR+A+ A+ +V Sbjct: 20 IPVGANIVCADNSGAKILEVINVPRHRTRASRLPSASVGDFCNVVVKKGPAELRKQVYGAVIIRQKYPVRRLNGVRVCFEDNAAVLITPEGETKGTDIKGPVAAEASEKWPRVANLASMVV 140
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METTP (50S ribosomal protein L14P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23 Identity = 55/130 (42.31%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 GNK ++ + + CAD+TGA+ L+++SVK +G NR P A +GDMV+ +V + AVI+RQ+K +RR DG+ + FEDNA VI + G KGS I GP+ +E A+ + +IAS+A IV Sbjct: 3 GNKAKIPRSINTGTYLECADNTGARTLFVVSVKKYRGVKNRQPCAGIGDMVVVSVKKGTPEMRKQIFNAVIIRQKKEFRRPDGLRVKFEDNAAVITDDAGVPKGSEIKGPVAREVAERFGKIASSAAIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_HALSA (50S ribosomal protein L14P OS=Halobacterium salinarium GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 49 KFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 K ++ GL + + CAD+TGA+ L I SV G +GR NR P A +GD + +V V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A IV Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_HALS3 (50S ribosomal protein L14P OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23 Identity = 58/128 (45.31%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 49 KFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 K ++ GL + + CAD+TGA+ L I SV G +GR NR P A +GD + +V V+ AV+VRQRKP RR DG + FEDNA VI++ GE +G+ I GPI +E A+ + IAS A IV Sbjct: 5 KADITQGLEKGSLITCADNTGARELKITSVMGYQGRKNRHPKAGLGDTITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIIDDLGEPRGTEIKGPISREVAERYGTIASTATMIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_SULAC (50S ribosomal protein L14P OS=Sulfolobus acidocaldarius GN=rpl14p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.057e-23 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 82 ATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 ++V AD++GAK II + G +G L R+P A + D+VM +V AVIVRQR P+RR DG ++ FEDNA VI+NP G KG+ + GPI +E A+ WP+IAS A ++ Sbjct: 22 SSVVVADNSGAKEAVIIGIYGYRGVLRRVPFANIADLVMVSVRKGSPDVRKQKFKAVIVRQRMPFRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASVATMVI 138
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_CALMQ (50S ribosomal protein L14P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl14p PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.052e-22 Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADDTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+KRG + G +R L G+ + + VN AD++GAK + +I V G K R+P VGDMV+ +V ++ A++VRQR+P+RR DG ++ FEDNA VIV +G++KG+ + GP+ E A WP++AS A I+ Sbjct: 1 MAKRGGPRTVGVPWRFHLTPGIFMNSLVNVADNSGAKVVKVIGVVGHYSKNVHRRIPGVSVGDMVVVSVQEGKPEMRKQILRAIVVRQRRPFRRPDGTWVAFEDNAVVIVTEEGQVKGTEVHGPVAMEAAQRWPQVASIATMII 144
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METBU (50S ribosomal protein L14P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl14p PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22 Identity = 54/130 (41.54%), Postives = 81/130 (62.31%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G + ++ L A + C D+TGA+ + IISVK +G NR+P +GDM + +V ++ AVIVRQ+K +RR DG+ + FEDNA VIV+ KG KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 3 GIRSKIPRALNAGAKIECVDNTGARTVEIISVKKYRGVKNRMPKGGIGDMCVVSVKKGTPEMRKQILYAVIVRQKKEFRRPDGIRVAFEDNAVVIVDDKGIPKGTDIKGPVAREAAERFPKIGTTASMIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRCJ (50S ribosomal protein L14P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl14p PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.519e-21 Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 13 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADDTGAKNLYIISVKG--IKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+KRG + G +F ++ G+ + + V AD++GAK + +I V G K R+P A VGDMV+ V + A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ +V Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKSVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRAE (50S ribosomal protein L14P OS=Pyrobaculum aerophilum GN=rpl14p PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.984e-21 Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 13 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+KRG + G +F ++ G+ + + V AD++GAK + +I V G + R+P A VGDMV+ V + A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ +V Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |