CX294317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_HALMA (50S ribosomal protein L14P OS=Haloarcula marismortui GN=rpl14p PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.592e-21 Identity = 54/122 (44.26%), Postives = 73/122 (59.84%), Query Frame = 1 Query: 67 GLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 GL + + CAD+TGA+ L +ISV G G NR P A +GD + +V V+ AV+VRQRKP RR DG + FEDNA VIV+ + +G+ + GPI +E A + +ASAA IV Sbjct: 11 GLEKGSLITCADNTGARELKVISVHGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVVRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAQRFGSVASAATMIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_HALLT (50S ribosomal protein L14P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl14p PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.592e-21 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 49 KFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 K ++ GL + + CAD+TGA+ L +ISV G G NR P A +GD V +V V+ AV+VRQRKP RR +G + FEDNA VI++ E +G+ I GP+ +E A+ + IAS A IV Sbjct: 5 KADVTQGLSKGSLITCADNTGARELKVISVAGYSGTKNRHPKAGIGDKVTVSVTKGTPEMRRQVLEAVVVRQRKPIRRPNGTRVKFEDNAAVIIDDLDEPRGTEIKGPVAREVAERFGSIASTATMIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRIL (50S ribosomal protein L14P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl14p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.385e-21 Identity = 58/144 (40.28%), Postives = 85/144 (59.03%), Query Frame = 1 Query: 13 MSKRGRGGSAGNKFRMSL--GLPVAATVNCADDTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+KRG + G +R + G+ + + V AD++GA+ + +I V G + R+P A VGDMV+ V + A++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ IV Sbjct: 1 MAKRGGKRTVGVSYRFHVTPGIFLNSLVPVADNSGARLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIIV 144
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_HALWD (50S ribosomal protein L14P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl14p PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.385e-21 Identity = 58/128 (45.31%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 49 KFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 K ++ GL + V CAD+TGA+ L +ISV G G NR P A +GD V +V V+ AVIVRQRK RR DG + FEDNA VI++ E +G+ I GPI +E A+ + IAS A IV Sbjct: 5 KADVTKGLERGSLVTCADNTGARELKVISVMGSSGTKNRHPKAGIGDQVTVSVTKGTPEMRRQVLEAVIVRQRKSIRRPDGTRVKFEDNAAVIIDEMEEPRGTEIKGPIAREVAERFGSIASTATMIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_PYRAR (50S ribosomal protein L14P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl14p PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.774e-21 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 1 Query: 13 MSKRGRGGSAG--NKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRL--NRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 M+KRG + G +F ++ G+ + + V AD++GAK + +I V G + R+P A VGDMV+ V + ++VRQR+P+RR DG ++ FEDNA VIV P+G+ KGS I GP+ E WP IA+ A+ +V Sbjct: 1 MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVKEGKPELRRQIFRGIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV 144
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METBF (50S ribosomal protein L14P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl14p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.848e-21 Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G + + L A V C D+TGAK + IISVK +G NR+P A +GDM + +V V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G KG+ I GPI +E A+ +P+I + A+ IV Sbjct: 3 GIRSNIPRALNAGAKVPCVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLRVSFEDNAMVITDEEGIPKGTDIKGPIAREVAERYPKIGTTASIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METAC (50S ribosomal protein L14P OS=Methanosarcina acetivorans GN=rpl14p PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.848e-21 Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G + + L A + C D+TGAK + IISVK +G NR+P A +GDM + +V V+ AV+VRQ++ +RR DG+ + FEDNA VI + +G KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 3 GMRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQVLLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEEGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_NATPD (50S ribosomal protein L14P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl14p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.680e-20 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 67 GLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 GL + + CAD+TGA+ L + S+ G G NR P A +GD + +V V+ AV++RQRKP RR DG + FEDNA VIV+ + +G+ + GPI +E A+ + IAS A IV Sbjct: 11 GLEKGSLITCADNTGARELKVTSISGYSGTKNRHPKAGLGDKITVSVTKGTPEMRRQVLEAVVIRQRKPIRRPDGTRVKFEDNAAVIVDENEDPRGTELKGPIAREVAERFGSIASTATIIV 132
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_NANEQ (50S ribosomal protein L14P OS=Nanoarchaeum equitans GN=rpl14p PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.680e-20 Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 70 LPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNA-GVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 LPV A +N AD++GAK + +I+VKG KGR RL A + D+V+ +V + AV+VR +K WRR+DG + FEDNA ++ + G KG+ I PI KE A+ WP +A A IV Sbjct: 12 LPVGAYLNVADNSGAKVVKLIAVKGYKGRKRRLAKAGIADLVIVSVRDGKPDMIGQIFKAVVVRMKKEWRRRDGTRIKFEDNAVALLKDDYGTPKGTIIKTPIAKEVAERWPDLAKIARIIV 133
BLAST of CX294317 vs. ExPASy Swiss-Prot
Match: RL14_METMA (50S ribosomal protein L14P OS=Methanosarcina mazei GN=rpl14p PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.865e-20 Identity = 52/130 (40.00%), Postives = 79/130 (60.77%), Query Frame = 1 Query: 43 GNKFRMSLGLPVAATVNCADDTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVXXXXXXXXXXVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 432 G + + L A + C D+TGAK + IISVK +G NR+P A +GDM + +V ++ AV+VRQ++ +RR DG+ + FEDNA VI + G KG+ I GP+ +E A+ +P+I + A+ IV Sbjct: 3 GIRSNIPRALNAGAQIACVDNTGAKVVEIISVKKYRGVKNRMPCAGIGDMCVVSVKKGTPEMRKQILLAVVVRQKQEFRRPDGLHVSFEDNAMVITDEDGIPKGTDIKGPVAREVAERFPKIGTTASIIV 132 The following BLAST results are available for this feature:
BLAST of CX294317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294317 ID=CX294317; Name=CX294317; organism=Citrus clementina; type=EST; length=559bpback to top |