CX294348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ERG24_BOVIN (Delta(14)-sterol reductase OS=Bos taurus GN=TM7SF2 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.932e-21 Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 3 Query: 81 SFIFCIFLYIKGHLAPSST--DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLLFV 545 +FIF + LY+K LAP+S G+ GN+I DF+ G EL PRI +FD K F R G++ W ++ + I++ E +M + L+YV +E +TMDI HD GF + +G L WVP Y+ +L+ HP LG ++S + + Sbjct: 141 AFIFSLLLYLKALLAPASALAPGGNSGNLIYDFFLGRELNPRIC-SFDFKYFCELRPGLIGWVLINLALLIQEAELRGSPSLAMWLVNGFQLLYVGDALWYEEAVLTTMDIIHDGFGFMLAFGDLAWVPFTYSLQAQFLLYHPQPLGWPLASFICLI 296
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ERG24_HUMAN (Delta(14)-sterol reductase OS=Homo sapiens GN=TM7SF2 PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 3.296e-21 Identity = 56/157 (35.67%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 81 SFIFCIFLYIKGHLAPSST--DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLLFV 545 +FIF +FLY+K +AP S G+ GN I DF+ G EL PRI FD K F R G++ W ++ + +K+ E +M + L+YV E +TMDI HD GF + +G + WVP Y+ +L++HP LG ++SV+ + Sbjct: 141 AFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFLGRELNPRICF-FDFKYFCELRPGLIGWVLINLALLMKEAELRGSPSLAMWLVNGFQLLYVGDALWHEEAVLTTMDITHDGFGFMLAFGDMAWVPFTYSLQAQFLLHHPQPLGLPMASVICLI 296
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ERG24_NEUCR (Delta(14)-sterol reductase OS=Neurospora crassa GN=erg-3 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.304e-21 Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 30 TIVYDHLGEIYSALIFGSFIFCIFLYIKGH-LAPSSTD------SGSCGNIIIDFYWGMELYPRIGK----NFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLG 515 T + D+ +I SA I +F IF+Y++ + P + D G G++I DFY G EL PRI DIK F R G++ W +L + KQY V DS+L T + YV E +TMDI D GF + +G +VWVP +Y++ YL HP LG Sbjct: 154 TFISDNFAQIISANILFAFALAIFVYVRSFDVKPGNKDMRQLAAGGVTGSLIYDFYIGRELNPRITLPLIGQVDIKEFMEMRPGLLGWIILNCAFIAKQYRLYGYVTDSILFITAIQAFYVFDGIYMEPAVLTTMDITTDGFGFMLSFGDVVWVPFMYSTQTRYLSVHPQQLG 326
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: LBR_CHICK (Lamin-B receptor OS=Gallus gallus GN=LBR PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.342e-21 Identity = 59/172 (34.30%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 36 VYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS--TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSM---LVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVL 536 +YDH + + S I+LYI+ AP G+ G ++ DF+ G EL PRIG +FD+K F R G++ W V+ + + + + + + S+ LVN+ L+YV E +TMDI HD GF + +G LVWVP VY+ YLV HP+ + V++ + Sbjct: 314 LYDHFVQFAVSAAAFSMALSIYLYIRSLKAPEEDLAPGGNSGYLVYDFFTGHELNPRIG-SFDLKYFCELRPGLIGWVVINLAMLLAEMKIHNQSMPSLSMILVNSF-QLLYVVDALWNEEAVLTTMDITHDGFGFMLAFGDLVWVPFVYSLQAFYLVGHPIAISWPVAAAI 483
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ERG24_SCHPO (Delta(14)-sterol reductase OS=Schizosaccharomyces pombe GN=erg24 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.342e-21 Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = 3 Query: 36 VYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSS-TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEA-NAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLG 515 ++D+ ++ A S + C F Y++ G+ GNI+ D++ G L PRIG NFDIK F R G++ W V + + QY ++ DSM++ I YV + E+ +TMDI D G+ + +G LVWVP +Y+ YL HPV LG Sbjct: 132 IWDNFLQLMFAAYVFSVVLCTFCYVQSFFGKQQLAKGGTSGNILFDWFIGRSLNPRIG-NFDIKCFCELRPGLILWVVFDIAFACHQYLVLGGRITDSMVLVIIFHTWYVLDSLINESAVLTTMDITTDGFGYMLSFGDLVWVPFLYSLQARYLAFHPVDLG 292
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: LBR_PONAB (Lamin-B receptor OS=Pongo abelii GN=LBR PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.790e-20 Identity = 58/172 (33.72%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 36 VYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSM---LVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLL 539 VY H + A + ++LY++ AP + S S GN + DF+ G EL PRIG FD+K F R G++ W V+ + + + + + S+ LVN+ L+YV E +TMDI HD GF + +G LVWVP +Y+ YLV+HP + ++S+++ Sbjct: 322 VYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPASSGNAVYDFFIGRELNPRIG-TFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAMILVNSF-QLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPNEVSWPMASLII 491
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: LBR_HUMAN (Lamin-B receptor OS=Homo sapiens GN=LBR PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.790e-20 Identity = 58/172 (33.72%), Postives = 91/172 (52.91%), Query Frame = 3 Query: 36 VYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSM---LVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLL 539 VY H + A + ++LY++ AP + S S GN + DF+ G EL PRIG FD+K F R G++ W V+ + + + + + S+ LVN+ L+YV E +TMDI HD GF + +G LVWVP +Y+ YLV+HP + ++S+++ Sbjct: 322 VYSHFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSPASSGNAVYDFFIGRELNPRIG-TFDLKYFCELRPGLIGWVVINLVMLLAEMKIQDRAVPSLAMILVNSF-QLLYVVDALWNEEALLTTMDIIHDGFGFMLAFGDLVWVPFIYSFQAFYLVSHPNEVSWPMASLII 491
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ERG24_MOUSE (Delta(14)-sterol reductase OS=Mus musculus GN=Tm7sf2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.118e-20 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 3 Query: 81 SFIFCIFLYIKGHLAPSST--DSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVL 536 SFIF + LY K +AP+S G+ GN + DF+ G EL PR+G +FD K F R G++ W + + +++ E +M + L+YV +E +TMDI HD GF + +G L WVP Y+ +L+ HP LG ++ ++ Sbjct: 141 SFIFSLLLYAKALVAPASALAPGGNSGNSMYDFFLGRELNPRLG-SFDFKYFCELRPGLIGWVFINLALLMQEAELRGSPSLAMWLVNGFQLLYVGDALWYEESVLTTMDIIHDGFGFMLVFGDLAWVPFTYSLQAQFLLYHPQPLGLPMALLI 293
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: LBR_MOUSE (Lamin-B receptor OS=Mus musculus GN=Lbr PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.385e-19 Identity = 58/172 (33.72%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 36 VYDHLGEIYSALIFGSFIFCIFLYIKGHLAPSSTDS-GSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSM---LVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLGTQVSSVLL 539 +Y H ++ A S + +LY++ AP S S GN + DF+ G EL PR+G FD+K F R G++ W V+ + + + + + S+ LVN+ L+YV E ++MDI HD GF + +G LVWVP Y+ YLV+HP L ++SV++ Sbjct: 333 LYTHFLQLALAATGFSVLLSAYLYVRSLRAPREELSPASSGNAVYDFFIGRELNPRLGA-FDLKFFCELRPGLIGWVVINLVMLLMEMKIQERAAPSLAMILVNSF-QLLYVVDALWNEEALLTSMDIMHDGFGFMLAFGDLVWVPFTYSLQAFYLVSHPHDLSWPLASVII 502
BLAST of CX294348 vs. ExPASy Swiss-Prot
Match: ERG24_ASCIM (Delta(14)-sterol reductase OS=Ascobolus immersus GN=ERG3 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.029e-19 Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 42 DHLGEIYSALIFGSFIFCIFLYIKGHLAPSS------TDSGSCGNIIIDFYWGMELYPRIGKNFDIKVFTNCRFGMMSWAVLAVTYCIKQYEANAKVEDSMLVNTILMLIYVTKFFLWEAGYWSTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVHLG 515 D+ ++ SA I S+ +++YI+ + + G GN I DF+ G EL PRIG+ DIK R G+M W + + + +KQY + V DS+++ + YV E+ +TMDI D G + +G VWVP +Y YL + PVHLG Sbjct: 135 DNFAQLQSASIVFSYAMSLWVYIRSYRPMPKGKEVILSPVGFKGNHIHDFWMGRELNPRIGEWLDIKQLHELRPGLMGWILFNLAWTVKQYNTHGFVSDSIVLVNLFETWYVVDALWNESKVLTTMDITTDGLGVMLLFGNAVWVPFMYCLQARYLASFPVHLG 298 The following BLAST results are available for this feature:
BLAST of CX294348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX294348 ID=CX294348; Name=CX294348; organism=Citrus clementina; type=EST; length=554bpback to top |