CX294350

Overview
NameCX294350
Unique NameCX294350
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length479
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: DAP1_YEAST (Damage response protein 1 OS=Saccharomyces cerevisiae GN=DAP1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.236e-13
Identity = 41/107 (38.32%), Postives = 61/107 (57.01%), Query Frame = 2
Query:  176 PVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE---EKDLTGDISGLGPF---ELEALQDWEYKFMSKYVKVGS 478
            PV  G      L +++G D +K + +AI+ ++YD ++ R FYGP GPY  FAG DASR LA  SF+    KD    I  L      +++AL +W+  F +KY  +G+
Sbjct:   38 PVVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGT 143          
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEBR (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.236e-13
Identity = 40/113 (35.40%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  152 EQMEPLPPPVQLGE-----ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475
            E ++ + P V +        T E+L  +DGS   KP  +AI  ++YDV   + +YGPG  Y  FAG+DA+RA     F E  L     GL   EL +++DW   +  +Y  VG
Sbjct:   82 EHLQAINPEVDVAAGGKHVFTPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTENGLVASTHGLSHDELLSIRDWVSFYDKEYPLVG 194          
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEEL (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=tag-131 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12
Identity = 38/113 (33.63%), Postives = 60/113 (53.10%), Query Frame = 2
Query:  152 EQMEPLPPPVQLGE-----ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475
            E ++ + P V +        T E+L  +DG+   KP+ +AI  ++Y+V   + +YGPG  Y  FAG+DA+RA     F+E  L     GL   EL +++DW   +  +Y  VG
Sbjct:   82 EHIQAINPEVDVAAGGKHVFTPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVG 194          
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: CB5D2_MOUSE (Cytochrome b5 domain-containing protein 2 OS=Mus musculus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.394e-12
Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 2
Query:  203 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA     + E  L  DI+GL   E+  L +W   +   YV VG
Sbjct:   41 EELARYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDINGLSSSEILTLHNWLSFYEKNYVFVG 131          
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: CB5D2_RAT (Cytochrome b5 domain-containing protein 2 OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.432e-12
Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 2
Query:  203 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA     + E  L  D++GL   E+  L +W   +   YV VG
Sbjct:   41 EELARYRGGPGDPGLYLALLGRVYDVSSGRKHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDVNGLSSSEILTLHNWLSFYEKNYVFVG 131          
BLAST of CX294350 vs. ExPASy Swiss-Prot
Match: CB5D2_HUMAN (Cytochrome b5 domain-containing protein 2 OS=Homo sapiens GN=CYB5D2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.752e-11
Identity = 36/91 (39.56%), Postives = 47/91 (51.65%), Query Frame = 2
Query:  203 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKVG 475
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA       E  L  D+S L   E+  L +W   +   YV VG
Sbjct:   41 EELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVG 131          
The following BLAST results are available for this feature:
BLAST of CX294350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
DAP1_YEAST5.236e-1338.32Damage response protein 1 OS=Saccharomyces cerevis... [more]
CB5D2_CAEBR5.236e-1335.40Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_CAEEL1.989e-1233.63Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_MOUSE3.394e-1240.66Cytochrome b5 domain-containing protein 2 OS=Mus m... [more]
CB5D2_RAT4.432e-1239.56Cytochrome b5 domain-containing protein 2 OS=Rattu... [more]
CB5D2_HUMAN3.752e-1139.56Cytochrome b5 domain-containing protein 2 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionC05015F01SK FlavSen1 Citrus clementina cDNA clone C05015F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294350 ID=CX294350; Name=CX294350; organism=Citrus clementina; type=EST; length=479bp
ACTCTAAAAGAGGCGATAACAGCGTACACGGGGCTCTCCCCGGCGGCGTT
TTTTACAGTTGTTGCGTTGCTGTGGGCCATATACTATGTTCTGTCGGGAA
TGTTTGGTGTCGTCCGATAATCATCATCAGCAGAGATCGAGGGAGTACGA
GGAACAGATGGAGCCTCTGCCACCGCCTGTTCAGCTAGGCGAGATTACCG
AGGAGGAGCTCAAACAGTACGATGGCTCCGATTCCAAAAAGCCCCTTCTC
ATGGCCATCAAGAGCCAGATCTACGATGTCTCTCAGAGCAGGATGTTTTA
TGGACCTGGTGGGCCATATGCGTTGTTTGCTGGAAAGGATGCTAGCAGGG
CCCTTGCCAAGATGTCTTTTGAGGAAAAAGATTTAACTGGTGATATCTCT
GGTCTTGGTCCATTTGAGTTGGAGGCATTGCAGGACTGGGAGTATAAGTT
CATGAGCAAGTATGTTAAGGTTGGATCTA
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