CX294358

Overview
NameCX294358
Unique NameCX294358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.036e-21
Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 1
Query:  253 QTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            QT+S+VD+LDDGYRWRKYGQKVVK +  PRSYYKCT   C V+K V+R + D + V+TTYEG H H +
Sbjct:  297 QTKSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTTPNCTVRKHVERASTDAKAVITTYEGKHNHDV 364          

HSP 2 Score: 77.411 bits (189), Expect = 6.241e-14
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            DDGY WRKYGQK +K  ++PRSYYKCTH  C VKK+V+R++ D +I    Y+G H H
Sbjct:  167 DDGYNWRKYGQKPIKGCEYPRSYYKCTHVNCPVKKKVERSS-DGQITQIIYKGQHDH 222          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.271e-21
Identity = 45/72 (62.50%), Postives = 54/72 (75.00%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R   QT S+VDILDDGYRWRKYGQKVV+ +  PRSYYKCT  GC V+K V+R + D + V+TTYEG H H +
Sbjct:  368 RVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTAHGCPVRKHVERASHDPKAVITTYEGKHDHDV 439          

HSP 2 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  274 ILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            + DDGY WRKYGQK VK S+FPRSYYKCTH  C VKK  +R + D +I    Y+G H HP
Sbjct:  209 LADDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFER-SHDGQITDIIYKGTHDHP 267          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.885e-21
Identity = 44/98 (44.90%), Postives = 65/98 (66.33%), Query Frame = 1
Query:  157 SGGASGTSGSDKAKQSXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            SG A+  S  +   +             R AF+TRS++D++DDG++WRKYG+K VKN+   R+YYKC+ +GC+VKK+V+R+  D   V+TTYEG+H H
Sbjct:   69 SGSATTLSKKESTNRGSKESDQTKETGHRVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNH 166          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.992e-21
Identity = 45/72 (62.50%), Postives = 52/72 (72.22%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R   QT S +DILDDGYRWRKYGQKVVK +  PRSYYKCT  GC V+K V+R + D   V+TTYEG H H +
Sbjct:  349 RIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHDV 420          

HSP 2 Score: 72.4034 bits (176), Expect = 2.008e-12
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            +DGY WRKYGQK VK S+ PRSYYKCT   C  KK+V+R+  + +I    Y+G H HP
Sbjct:  184 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSL-EGQITEIVYKGSHNHP 240          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.174e-20
Identity = 44/71 (61.97%), Postives = 56/71 (78.87%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            + +F TRS+V  LDDGY+WRKYGQK VK+S FPR+YY+CT   C+VKK+V+R+  D   V+TTYEG HTHP
Sbjct:  105 KVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCTTTWCDVKKRVERSFSDPSSVITTYEGQHTHP 175          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.778e-19
Identity = 41/77 (53.25%), Postives = 57/77 (74.03%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH--PIGKI 465
            R    T++  DI++DGYRWRKYGQK VK S +PRSYY+C+  GC VKK V+R++ D ++++TTYEG H H  P G++
Sbjct:  294 RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDHDMPPGRV 370          

HSP 2 Score: 77.7962 bits (190), Expect = 4.779e-14
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query:  274 ILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            +++DGY WRKYGQK+VK ++F RSYY+CTH  C  KKQ++R+    ++V T Y G H HP
Sbjct:  109 VMEDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLERSA-GGQVVDTVYFGEHDHP 167          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.198e-18
Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 1
Query:  244 YAFQTRSQVD---ILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            + F+T+S +D    LDDGY+WRKYG+K +  S FPR Y+KC+   CNVKK+++R+T + + ++TTYEG H HP
Sbjct:   94 HVFKTKSSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRHNHP 166          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17
Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            R   Q  S  D  +DGYRWRKYGQKVVK +  PRSY+KCT+  C VKK V+R   + ++VVTTY+G+H HP
Sbjct:  294 RIILQMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNIECRVKKHVERGADNIKLVVTTYDGIHNHP 364          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHK-GCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R + + RS+  +L DG +WRKYGQK+ K +  PR+YY+CT   GC V+KQVQR  +D  I++TTYEG H HP+
Sbjct:  279 RVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPL 351          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCT-HKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R + + RS+  ++ DG +WRKYGQK+ K +  PR+YY+CT   GC V+KQVQR  +D  I++TTYEG H HP+
Sbjct:  299 RVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPL 371          
The following BLAST results are available for this feature:
BLAST of CX294358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
WRK58_ARATH4.036e-2163.24Probable WRKY transcription factor 58 OS=Arabidops... [more]
WRK20_ARATH5.271e-2162.50Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRK51_ARATH6.885e-2144.90Probable WRKY transcription factor 51 OS=Arabidops... [more]
WRK33_ARATH8.992e-2162.50Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRK68_ARATH1.174e-2061.97Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRKY1_ARATH3.778e-1953.25WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
WRK59_ARATH3.198e-1850.68Probable WRKY transcription factor 59 OS=Arabidops... [more]
WRK10_ARATH1.215e-1756.34Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK42_ARATH1.755e-1652.05Probable WRKY transcription factor 42 OS=Arabidops... [more]
WRKY6_ARATH2.292e-1650.68WRKY transcription factor 6 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionC05015F09SK FlavSen1 Citrus clementina cDNA clone C05015F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294358 ID=CX294358; Name=CX294358; organism=Citrus clementina; type=EST; length=606bp
TTTTAATTATTGTGCTTCTGCTTGATGGTAGTGGTAGAGCAGTCCCATAT
GGACAACTCCCATTTACAGTCAAGATTTTCAGCTTCTCATTCCTCATTGA
ACATGGGAATTGATCCCCGTGCACAATAACATGCTGTATCTGAATTTCAA
CTTTACTCAGGTGGTGCTAGTGGAACCTCTGGGAGTGATAAGGCGAAACA
ATCTGGAAAGAAAGGAGACCACAAAGGGACCAAAAAGCACAGATATGCTT
TTCAAACGAGAAGCCAGGTTGACATACTTGATGACGGTTATAGATGGAGG
AAATATGGACAAAAGGTTGTAAAGAACAGCAAGTTCCCCAGGAGTTACTA
CAAATGTACTCACAAAGGGTGCAATGTGAAAAAGCAAGTCCAACGCAATA
CAAAAGATGAAGAGATTGTGGTGACAACCTATGAAGGACTGCATACACAT
CCAATTGGGAAGATCACCGACAGCTTTGAACAGATCCTGCTGAAAGCATG
TACCACTTCGTAATTTGAAAGCTGTCGCCATTGATCCTCATTTCAAGAGT
GTTATGTGCCAGTGTTTGATGTATATGCCATTTATTATTGCTGACTTTCA
TTATCA
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