CX294358

Overview
NameCX294358
Unique NameCX294358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK49_ARATH (Probable WRKY transcription factor 49 OS=Arabidopsis thaliana GN=WRKY49 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 37/71 (52.11%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  241 RYAFQTRSQVD-ILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            RY  + ++  + + DDGY+WRKYGQK +KNS  PRSYYKCT+  CN KKQV+R+  +    + TYEG H H
Sbjct:  100 RYTLKVKNNSNGMCDDGYKWRKYGQKSIKNSPNPRSYYKCTNPICNAKKQVERSIDESNTYIITYEGFHFH 170          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.993e-16
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHK-GCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R + + RS+  ++ DG +WRKYGQK+ K +  PR+YY+CT   GC V+KQVQR  +D  I++TTYEG H HP+
Sbjct:  284 RVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPL 356          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK40_ARATH (Probable WRKY transcription factor 40 OS=Arabidopsis thaliana GN=WRKY40 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.137e-15
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1
Query:  160 GGASGTSGSDK-----AKQSXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCT-HKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPIGKITDS 474
            GG S +S +D+      KQ              Y  +      ++ DGY+WRKYGQKV +++  PR+Y+KC     C+VKK+VQR+ +D+ ++V TYEG H HP+    DS
Sbjct:  101 GGVSESSSTDQDEYLCKKQREETVVKEKVSRVYYKTEASDTTLVVKDGYQWRKYGQKVTRDNPSPRAYFKCACAPSCSVKKKVQRSVEDQSVLVATYEGEHNHPMPSQIDS 211          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCT-HKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R + + R +   ++DG +WRKYGQK  K +  PR+YY+CT   GC V+KQVQR  +D  I++TTYEG H HP+
Sbjct:  222 RVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPL 294          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.534e-15
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHK-GCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R + + RS    ++DG +WRKYGQK+ K +  PR+YY+CT   GC V+KQVQR  +D  I+ TTYEG H HP+
Sbjct:  226 RVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPL 298          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.309e-15
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            D L+DG+RWRKYGQKVV  + +PRSYY+CT   C  +K V+R + D    +TTYEG H H
Sbjct:  346 DSLEDGFRWRKYGQKVVGGNAYPRSYYRCTSANCRARKHVERASDDPRAFITTYEGKHNH 405          

HSP 2 Score: 72.7886 bits (177), Expect = 1.537e-12
Identity = 32/56 (57.14%), Postives = 40/56 (71.43%), Query Frame = 1
Query:  283 DGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            DGY WRKYGQK VK S+ PRSYYKCTH  C VKK+V+R+  + ++    Y+G H H
Sbjct:  166 DGYNWRKYGQKQVKGSECPRSYYKCTHPKCPVKKKVERSV-EGQVSEIVYQGEHNH 220          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.645e-15
Identity = 34/73 (46.58%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCT-HKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R + ++R +   ++DG +WRKYGQK+ K +  PR+YY+CT    C V+KQVQR ++D  I+++TYEG H HP+
Sbjct:  178 RVSVRSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPL 250          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.258e-14
Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            ++       V I  DGYRWRKYGQK+VK +  PR+YY+CT  GC V+K ++   ++ + V+ TY+G+H H
Sbjct:  318 KFVVHAAGDVGICGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVENTKAVIITYKGVHNH 387          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.642e-14
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCT-HKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            R   + R     ++DG +WRKYGQK+ K +  PR+YY+CT   GC V+KQVQR   D  I++TTYEG H+H +
Sbjct:  214 RVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSL 286          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY1_DICDI (Probable WRKY transcription factor protein 1 OS=Dictyostelium discoideum GN=wrky1 PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.098e-13
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPIGKIT 468
            +I+ DGY+WRKYGQK VK S  PR YYKCT +GCNV+KQV+R   D     T Y+G H H   + T
Sbjct:  811 NIVSDGYQWRKYGQKNVKGSLHPRHYYKCTFQGCNVRKQVER-IGDTNQNSTVYKGEHCHGFPQTT 875          

HSP 2 Score: 74.3294 bits (181), Expect = 5.284e-13
Identity = 36/71 (50.70%), Postives = 46/71 (64.79%), Query Frame = 1
Query:  241 RYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQV-QRNTKDEEIVVTTYEGLHTH 450
            +   +T S +D LDDG+ WRKYGQK VK S FP+SY+KC    C VKKQV Q+++K     + TY G H H
Sbjct: 1098 KLVIETGSSIDHLDDGFFWRKYGQKSVKGSPFPKSYFKCAELTCPVKKQVIQQDSK----YINTYRGKHNH 1164          
The following BLAST results are available for this feature:
BLAST of CX294358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
WRK49_ARATH2.292e-1652.11Probable WRKY transcription factor 49 OS=Arabidops... [more]
WRK31_ARATH2.993e-1650.68Probable WRKY transcription factor 31 OS=Arabidops... [more]
WRK40_ARATH1.137e-1537.84Probable WRKY transcription factor 40 OS=Arabidops... [more]
WRKY9_ARATH2.534e-1549.32Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK47_ARATH2.534e-1550.68Probable WRKY transcription factor 47 OS=Arabidops... [more]
WRK44_ARATH3.309e-1555.00WRKY transcription factor 44 OS=Arabidopsis thalia... [more]
WRK61_ARATH5.645e-1546.58Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK32_ARATH1.258e-1444.29Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK72_ARATH1.642e-1447.95Probable WRKY transcription factor 72 OS=Arabidops... [more]
WRKY1_DICDI3.098e-1354.55Probable WRKY transcription factor protein 1 OS=Di... [more]

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Properties
Property NameValue
Genbank descriptionC05015F09SK FlavSen1 Citrus clementina cDNA clone C05015F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294358 ID=CX294358; Name=CX294358; organism=Citrus clementina; type=EST; length=606bp
TTTTAATTATTGTGCTTCTGCTTGATGGTAGTGGTAGAGCAGTCCCATAT
GGACAACTCCCATTTACAGTCAAGATTTTCAGCTTCTCATTCCTCATTGA
ACATGGGAATTGATCCCCGTGCACAATAACATGCTGTATCTGAATTTCAA
CTTTACTCAGGTGGTGCTAGTGGAACCTCTGGGAGTGATAAGGCGAAACA
ATCTGGAAAGAAAGGAGACCACAAAGGGACCAAAAAGCACAGATATGCTT
TTCAAACGAGAAGCCAGGTTGACATACTTGATGACGGTTATAGATGGAGG
AAATATGGACAAAAGGTTGTAAAGAACAGCAAGTTCCCCAGGAGTTACTA
CAAATGTACTCACAAAGGGTGCAATGTGAAAAAGCAAGTCCAACGCAATA
CAAAAGATGAAGAGATTGTGGTGACAACCTATGAAGGACTGCATACACAT
CCAATTGGGAAGATCACCGACAGCTTTGAACAGATCCTGCTGAAAGCATG
TACCACTTCGTAATTTGAAAGCTGTCGCCATTGATCCTCATTTCAAGAGT
GTTATGTGCCAGTGTTTGATGTATATGCCATTTATTATTGCTGACTTTCA
TTATCA
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