CX294358

Overview
NameCX294358
Unique NameCX294358
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length606
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 1
Query:  247 AFQTRSQVDIL-DDGYRWRKYGQKVVKNSKFPRSYYKC-THKGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            A  +RS  +++  D + WRKYGQK +K S +PR YY+C + KGC+ +KQV+R+  D  ++V TY   H HP
Sbjct:  203 AMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHP 273          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKCTH-KGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            D+  D Y WRKYGQK +K S  PR YYKC+  +GC  +K V+R   D  +++ TYEG H H +
Sbjct:  237 DVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSL 299          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.473e-12
Identity = 32/61 (52.46%), Postives = 39/61 (63.93%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKC-THKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            DI  D Y WRKYGQK +K S  PR YYKC T +GC  +K V+R   D  +++ TYEG H H
Sbjct:  243 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRH 303          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 39/96 (40.62%), Postives = 48/96 (50.00%), Query Frame = 1
Query:  169 SGTSGSDKAKQSXXXXXXXXXXXXRYAFQTRSQVDILDDGYRWRKYGQKVVKNSKFPRSYYKCTHK---GCNVKKQVQRNTKDEEIVVTTYEGLHT 447
            SG SGS   +Q               A +T +     DD + WRKYGQK +  S+FPR+YY+CTH+    C  KKQVQR   D      TY G HT
Sbjct:  136 SGASGSSTPRQRRRKDEGEEQTVLVAALRTGNTDLPPDDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHT 231          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK29_ARATH (Probable WRKY transcription factor 29 OS=Arabidopsis thaliana GN=WRKY29 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKC-THKGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            ++L D + WRKYGQK +K S +PRSYY+C + KGC  +KQV+RN ++ E    TY   H H +
Sbjct:  131 NLLSDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERNPQNPEKFTITYTNEHNHEL 193          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.965e-12
Identity = 30/58 (51.72%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  277 LDDGYRWRKYGQKVVKNSKFPRSYYKCTHKGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            ++DGY W+KYGQK VK SKFP SYYKCT+ GC  K++V+R+  D ++    Y+  H H
Sbjct:  467 VNDGYNWQKYGQKKVKGSKFPLSYYKCTYLGCPSKRKVERSL-DGQVAEIVYKDRHNH 523          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.301e-11
Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKCTH-KGCNVKKQVQRNTKDEEIVVTTYEGLHTH 450
            DI  D Y WRKYGQK +K S  PR YYKC+  +GC  +K V+R  ++  +++ TYEG H H
Sbjct:  259 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNH 319          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1
Query:  283 DGYRWRKYGQKVVKNSKFPRSYYKCTH-KGCNVKKQVQRNTKDEEIVVTTYEGLHTHP 453
            D + WRKYGQK +K S +PR YY+C+  KGC  +KQV+R+  D  +++ TY   H HP
Sbjct:   75 DSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHP 132          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.220e-11
Identity = 31/59 (52.54%), Postives = 38/59 (64.41%), Query Frame = 1
Query:  280 DDGYRWRKYGQKVVKNSKFPRSYYKCTHK---GCNVKKQVQRNTKDEEIVVTTYEGLHT 447
            DD + WRKYGQK +  +KFPRSYY+CTH+    C   KQVQR+  D  +   TY G HT
Sbjct:  158 DDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHT 216          
BLAST of CX294358 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 30/63 (47.62%), Postives = 40/63 (63.49%), Query Frame = 1
Query:  271 DILDDGYRWRKYGQKVVKNSKFPRSYYKCTH-KGCNVKKQVQRNTKDEEIVVTTYEGLHTHPI 456
            DI  D + WRKYGQK +K S  PR YYKC+  +GC  +K V+R   D  +++ TYEG H H +
Sbjct:  278 DIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHAL 340          
The following BLAST results are available for this feature:
BLAST of CX294358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
WRK35_ARATH4.473e-1245.07Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRK15_ARATH4.473e-1247.62Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRK11_ARATH4.473e-1252.46Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK55_ARATH9.965e-1240.63WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRK29_ARATH9.965e-1247.62Probable WRKY transcription factor 29 OS=Arabidops... [more]
WRK19_ARATH9.965e-1251.72Probable WRKY transcription factor 19 OS=Arabidops... [more]
WRK74_ARATH1.301e-1149.18Probable WRKY transcription factor 74 OS=Arabidops... [more]
WRK65_ARATH2.220e-1148.28Probable WRKY transcription factor 65 OS=Arabidops... [more]
WRK53_ARATH2.220e-1152.54Probable WRKY transcription factor 53 OS=Arabidops... [more]
WRKY7_ARATH2.899e-1147.62Probable WRKY transcription factor 7 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC05015F09SK FlavSen1 Citrus clementina cDNA clone C05015F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294358 ID=CX294358; Name=CX294358; organism=Citrus clementina; type=EST; length=606bp
TTTTAATTATTGTGCTTCTGCTTGATGGTAGTGGTAGAGCAGTCCCATAT
GGACAACTCCCATTTACAGTCAAGATTTTCAGCTTCTCATTCCTCATTGA
ACATGGGAATTGATCCCCGTGCACAATAACATGCTGTATCTGAATTTCAA
CTTTACTCAGGTGGTGCTAGTGGAACCTCTGGGAGTGATAAGGCGAAACA
ATCTGGAAAGAAAGGAGACCACAAAGGGACCAAAAAGCACAGATATGCTT
TTCAAACGAGAAGCCAGGTTGACATACTTGATGACGGTTATAGATGGAGG
AAATATGGACAAAAGGTTGTAAAGAACAGCAAGTTCCCCAGGAGTTACTA
CAAATGTACTCACAAAGGGTGCAATGTGAAAAAGCAAGTCCAACGCAATA
CAAAAGATGAAGAGATTGTGGTGACAACCTATGAAGGACTGCATACACAT
CCAATTGGGAAGATCACCGACAGCTTTGAACAGATCCTGCTGAAAGCATG
TACCACTTCGTAATTTGAAAGCTGTCGCCATTGATCCTCATTTCAAGAGT
GTTATGTGCCAGTGTTTGATGTATATGCCATTTATTATTGCTGACTTTCA
TTATCA
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