CX294360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_HUMAN (40S ribosomal protein S26 OS=Homo sapiens GN=RPS26 PE=1 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_BOVIN (40S ribosomal protein S26 OS=Bos taurus GN=RPS26 PE=3 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34 Identity = 64/102 (62.75%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_SHEEP (40S ribosomal protein S26 OS=Ovis aries GN=RPS26 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 2.457e-33 Identity = 63/102 (61.76%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+A VF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEAGVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_CRICR (40S ribosomal protein S26 OS=Cricetus cricetus GN=RPS26 PE=3 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 2.457e-33 Identity = 63/102 (61.76%), Postives = 78/102 (76.47%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +NGR K GRGHV+P+RC+NC+RC PKDKAIK+F IRN+VE+AA+RDIS+ASVF Y +PK+Y++L YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVELHYCVSCAIHSKVVRNRSREARKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_OCTVU (40S ribosomal protein S26 OS=Octopus vulgaris GN=RPS26 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.032e-31 Identity = 63/102 (61.76%), Postives = 75/102 (73.53%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KR +NGR K GRGHVK +RC+NC+RC PKDKAIK+F IRN+VE+AA+RDISDASV+ Y++PK+Y KL YCVSCAIH KIV PP R R Sbjct: 1 MTSKRRNNGRGKKGRGHVKYIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYEVYALPKLYAKLLYCVSCAIHSKIVRNRSREARKDRTPPIRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_DROME (40S ribosomal protein S26 OS=Drosophila melanogaster GN=RpS26 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.761e-31 Identity = 63/106 (59.43%), Postives = 78/106 (73.58%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKD 377 M KKR + GRNK+ RGHVKPVRC+NC+RC PKDKAIK+F IRN+VE+AA+RDI++AS++ Y +PK+Y KL YCVSCAIH K+V PP R F KD Sbjct: 1 MTKKRRNGGRNKHNRGHVKPVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDITEASIWDSYVLPKLYAKLHYCVSCAIHSKVVRNRSREARRIRTPPLR-SFPKD 105
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26_ANOGA (40S ribosomal protein S26 OS=Anopheles gambiae GN=RpS26 PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 3.003e-31 Identity = 64/106 (60.38%), Postives = 77/106 (72.64%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKD 377 M KKR + GR K+ RGHVK VRC+NC+RC PKDKAIK+F IRN+VE+AA+RDISDASV++ Y +PK+Y KL YCVSCAIH K+V PP R F KD Sbjct: 1 MTKKRRNGGRCKHNRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSCAIHSKVVRNRSKETRRIRTPPQR-SFPKD 105
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS263_ARATH (40S ribosomal protein S26-3 OS=Arabidopsis thaliana GN=RPS26C PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.922e-31 Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKD 377 M KR + GRNK+ RGHVKP+RCSNC +C PKDKAIKRF +RN+VE AAIRD+ +ASV+ Y++PK+Y K QYCVSCAIH +V PPPR K+ Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKE 106
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS26L_HUMAN (Putative 40S ribosomal protein S26-like 1 OS=Homo sapiens GN=RPS26P11 PE=5 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 5.123e-31 Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVR 365 M KKR +N K GRGHV+P+RC+NC RC P DKAIK+F IRN+VE+AA+RDIS+ SVF Y +PK+Y+KL YCVSCAIH K+V PPPR R Sbjct: 1 MTKKRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPPPRFR 102
BLAST of CX294360 vs. ExPASy Swiss-Prot
Match: RS262_ARATH (40S ribosomal protein S26-2 OS=Arabidopsis thaliana GN=RPS26B PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30 Identity = 59/106 (55.66%), Postives = 73/106 (68.87%), Query Frame = 3 Query: 60 MVKKRASNGRNKNGRGHVKPVRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYSVPKMYLKLQYCVSCAIHGKIVXXXXXXXXXXXAPPPRVRFNKD 377 M KR + GRNK+ RGHV P+RCSNC +C PKDKAIKRF +RN+VE AAIRD+ +ASV+ Y++PK+Y K QYCVSCAIH +V PPPR K+ Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTPPPRFARRKE 106 The following BLAST results are available for this feature:
BLAST of CX294360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294360 ID=CX294360; Name=CX294360; organism=Citrus clementina; type=EST; length=518bpback to top |