CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNP6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemL PE=1 SV=4)

HSP 1 Score: 198.749 bits (504), Expect = 7.532e-51
Identity = 90/128 (70.31%), Postives = 111/128 (86.72%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGG+R+IM++VAPAGPMYQAGTLSGNPLAMTAGI TL+ L++P TYEYL++IT  L+ G++   ++ GHA CGG +SGMFGFFFTEGPV+N+EDAKKSD  KF+R +RGMLE+G+Y APSQF
Sbjct:  278 GLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPATYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF 405          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_NOSP7 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemL PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.191e-50
Identity = 92/128 (71.88%), Postives = 105/128 (82.03%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRRDIM MVAPAGP+YQAGTLSGNPLAMTAGI TL+ L++PGTY+YL +IT +L  G++   K+ GH  CGG IS MFG FFT GPV+N+EDAKKSDT KF R +RGMLE GVY APSQF
Sbjct:  277 GLPVGAYGGRRDIMSMVAPAGPVYQAGTLSGNPLAMTAGIKTLELLQKPGTYDYLERITKKLADGLLQIAKETGHTACGGQISAMFGLFFTSGPVHNYEDAKKSDTAKFGRFHRGMLERGVYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SYNJB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Synechococcus sp. GN=hemL PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.738e-50
Identity = 92/128 (71.88%), Postives = 105/128 (82.03%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IMEMVAPAGPMYQAGTLSGNPLAMTAGI TL  L+ PGTYEYL +IT +L  G++   ++ GH +CGGY+ GMFGFFFT GPV N+E+AK SD  KFAR +RGMLE GVY APSQF
Sbjct:  281 GLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIQTLDILRRPGTYEYLERITEKLATGLLQIARETGHEMCGGYLPGMFGFFFTAGPVRNYEEAKTSDLQKFARFHRGMLERGVYLAPSQF 408          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_CYAA5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain ATCC 51142) GN=hemL PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 4.882e-50
Identity = 91/128 (71.09%), Postives = 107/128 (83.59%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR+DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L++PGTY  L +IT +L++G++   K+AGH +CGGYI  MFG FFTEGPV N++DAKKSD  KF R +RGMLE+GVY APSQF
Sbjct:  278 GLPVGAYGGRKDIMSMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLQKPGTYNQLEQITQQLSEGLLKIAKEAGHQVCGGYIGAMFGLFFTEGPVRNYDDAKKSDLAKFGRFHRGMLEKGVYLAPSQF 405          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ANAVT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.376e-50
Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRRDIM M+APAGP+YQAGTLSGNPLAMTAGI TL+ L++PG YEYL +IT +L  G++   ++ GHA CGG+IS MFG FFT GPV+N+EDAK SDT KF R +RGMLE GVY APSQF
Sbjct:  277 GLPVGAYGGRRDIMSMIAPAGPVYQAGTLSGNPLAMTAGIKTLELLQKPGAYEYLERITKKLADGLLQVAQETGHAACGGHISAMFGLFFTSGPVHNYEDAKNSDTAKFGRFHRGMLERGVYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_CYAP4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=hemL PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 8.327e-50
Identity = 89/128 (69.53%), Postives = 109/128 (85.16%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRR+IM +VAPAGPMYQAGTLSGNPLAMTAGI TL+ +++ GTYEYL++IT +L  G++   ++AGH +CGG+ISGMFG FFT GPV+N+EDAKKSD  KF+  +RGMLE+GVY APSQF
Sbjct:  277 GLPVGAYGGRREIMSLVAPAGPMYQAGTLSGNPLAMTAGIKTLELIRQTGTYEYLDQITAKLINGLLTIAREAGHQVCGGHISGMFGLFFTAGPVHNYEDAKKSDLAKFSAFHRGMLEQGVYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ANASP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabaena sp. (strain PCC 7120) GN=hemL PE=3 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 1.420e-49
Identity = 90/128 (70.31%), Postives = 104/128 (81.25%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGRRDIM M+APAGP+YQAGTLSGNPLAMTAGI TL+ L++PG YEYL +IT +L  G++    + GHA CGG+IS MFG FFT GPV+N+EDAK SDT KF R +RGMLE GVY APSQF
Sbjct:  277 GLPVGAYGGRRDIMSMIAPAGPVYQAGTLSGNPLAMTAGIKTLELLQKPGAYEYLERITKKLADGLLQVALETGHAACGGHISAMFGLFFTSGPVHNYEDAKNSDTAKFGRFHRGMLERGVYLAPSQF 404          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_THEEB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Thermosynechococcus elongatus (strain BP-1) GN=hemL PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 2.423e-49
Identity = 89/128 (69.53%), Postives = 109/128 (85.16%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR +IM+MVAPAGP+YQAGTLSGNPLAMTAGI TL+ L  PG+YE+L++ITG+L QG++DA ++ GH +CGG+ISGMFG FFT GPV N+E AK+SD  KFA  +RGMLE+G+Y APSQF
Sbjct:  282 GLPVGAYGGRAEIMKMVAPAGPVYQAGTLSGNPLAMTAGIKTLEILSRPGSYEHLDRITGKLVQGLLDAAREFGHEVCGGHISGMFGLFFTAGPVTNYEQAKQSDLKKFAAFHRGMLEQGIYLAPSQF 409          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_MICAN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Microcystis aeruginosa (strain NIES-843) GN=hemL PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 2.423e-49
Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR DIM MVAPAGPMYQAGTLSGNPLAMTAGI TL+ L+ PGTY+YL+K+T  LT+G++   + AGH++ GGYIS MFG FFT  PV+N+EDAKK+D  KF R +RGMLE GVY APSQF
Sbjct:  278 GLPVGAYGGRADIMAMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLQRPGTYQYLDKVTKSLTEGLLKVARDAGHSVSGGYISAMFGMFFTGSPVHNYEDAKKADVAKFGRFHRGMLERGVYLAPSQF 405          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_CYAP8 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanothece sp. (strain PCC 8801) GN=hemL PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.164e-49
Identity = 90/128 (70.31%), Postives = 105/128 (82.03%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLPV AYGGR+DIMEMVAP+GPMYQAGTLSGNPLAMTAGI TL+ L++PGTY+YLN IT +L  G++   + AGHA+CGG+I  MFG F T GPV+N+EDAKKSD  KF R +R MLE GVY APSQF
Sbjct:  278 GLPVGAYGGRQDIMEMVAPSGPMYQAGTLSGNPLAMTAGIKTLELLQKPGTYDYLNDITQKLADGLLKLAQDAGHAVCGGHIGAMFGLFLTAGPVHNYEDAKKSDLVKFGRFHRAMLERGVYLAPSQF 405          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_SYNP67.532e-5170.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_NOSP72.191e-5071.88Glutamate-1-semialdehyde 2,1-aminomutase OS=Nostoc... [more]
GSA_SYNJB3.738e-5071.88Glutamate-1-semialdehyde 2,1-aminomutase OS=Synech... [more]
GSA_CYAA54.882e-5071.09Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_ANAVT6.376e-5070.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabae... [more]
GSA_CYAP48.327e-5069.53Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]
GSA_ANASP1.420e-4970.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Anabae... [more]
GSA_THEEB2.423e-4969.53Glutamate-1-semialdehyde 2,1-aminomutase OS=Thermo... [more]
GSA_MICAN2.423e-4970.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Microc... [more]
GSA_CYAP83.164e-4970.31Glutamate-1-semialdehyde 2,1-aminomutase OS=Cyanot... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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