CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SALEP (Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmonella enteritidis PT4 (strain P125109) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++A   +   ++ GMFG FFT+   V  ++D    D  +F R +  MLEEGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLDELTTRLAEGLLEAAEEANIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHLMLEEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SALDC (Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmonella dublin (strain CT_02021853) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++A   +   ++ GMFG FFT+   V  ++D    D  +F R +  MLEEGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLDELTTRLAEGLLEAAEEANIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHLMLEEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_SALA4 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmonella agona (strain SL483) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+++A ++A   +   ++ GMFG FFT+   V  ++D    D  +F R +  MLEEGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGIHETLDELTTRLAEGLLEAAEEANIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHLMLEEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_NITEU (Glutamate-1-semialdehyde 2,1-aminomutase OS=Nitrosomonas europaea GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 60/128 (46.88%), Postives = 86/128 (67.19%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLP+ A+GGRRD+ME +AP G +YQAGTLSGNP+A+ AG+ TL +++ PG ++ L+ +T +LT+G+     K   A C   + GMFG +F + P  +F +  +SD   F   +  ML+EGVYFAPS F
Sbjct:  271 GLPMAAFGGRRDVMECLAPLGSVYQAGTLSGNPVAVAAGLETLHQIQVPGFFDKLSTMTRKLTEGLTAVAAKHSVAFCAQAVGGMFGLYFRKSPPESFAEVMESDREAFNHFFHAMLKEGVYFAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ECOUT (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli (strain UTI89 / UPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+ +A ++AG  +   ++ GMFG FFT+   V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ECOL6 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O6 GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+ +A ++AG  +   ++ GMFG FFT+   V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ECOL5 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+ +A ++AG  +   ++ GMFG FFT+   V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ECOK1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O1:K1 / APEC GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+ +A ++AG  +   ++ GMFG FFT+   V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ECO81 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O81 (strain ED1a) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+ +A ++AG  +   ++ GMFG FFT+   V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAF 398
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_ECO7I (Glutamate-1-semialdehyde 2,1-aminomutase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=hemL PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG-PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRD+M+ +AP GP+YQAGTLSGNP+AM AG   L  + +PG +E L+++T  L +G+ +A ++AG  +   ++ GMFG FFT+   V  ++D    D  +F R +  ML+EGVY APS F
Sbjct:  270 GMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLREAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAF 398
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_SALEP1.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmon... [more]
GSA_SALDC1.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmon... [more]
GSA_SALA41.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Salmon... [more]
GSA_NITEU1.929e-3046.88Glutamate-1-semialdehyde 2,1-aminomutase OS=Nitros... [more]
GSA_ECOUT1.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOL61.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOL51.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECOK11.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO811.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]
GSA_ECO7I1.929e-3047.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Escher... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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