CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRATN (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. novicida (strain U112) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGFFDELGAKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRATF (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGFFDELGAKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRAT1 (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGFFDELGAKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_DICNV (Glutamate-1-semialdehyde 2,1-aminomutase OS=Dichelobacter nodosus (strain VCS1703A) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+ G  D+M M++P G +YQAGTLSGNP+AM AGI  L+  +  G Y+ L   T +L +G+  A KK G  +    + GM G FFT+ P V NF D + +DT +FA+ +  ML EGV  APS +
Sbjct:  268 GMPVGAFAGSADLMSMLSPVGSVYQAGTLSGNPVAMIAGITNLRLTEAEGFYDTLAAKTQKLAEGLRQAAKKNGIHVVVNDVCGMLGLFFTDLPQVCNFADVQTADTARFAKFFHAMLAEGVNLAPSAY 396          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_RHOFD (Glutamate-1-semialdehyde 2,1-aminomutase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25
Identity = 54/128 (42.19%), Postives = 79/128 (61.72%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+P+ A+G +R +ME +AP G +YQAGTLSGNP+A   G+ TL+ + +PG YE L + T  LT G+  A    G A       GMFGFF  +    N+    KSD+ +F +++ G+L+ GVY AP+ +
Sbjct:  279 GMPLAAFGAKRAVMEHLAPLGTVYQAGTLSGNPVATACGLATLREISKPGFYESLARTTRSLTDGLKAAATAEGLAFSADSEGGMFGFFLLDTLPQNYVQVMKSDSARFNQLFHGLLDRGVYIAPALY 406          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_NEIMA (Glutamate-1-semialdehyde 2,1-aminomutase OS=Neisseria meningitidis serogroup A GN=hemL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25
Identity = 54/128 (42.19%), Postives = 78/128 (60.94%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+P+ A+GGR+DIME ++P G +YQAGTLSGNP+A+ AG+ TL+ ++  G YE L   T +L QG   A   AG       + GMFG +F      N+ D  +S+   F + + GML+ G+ F PS +
Sbjct:  270 GMPLAAFGGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQGFRTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIEGFKQFFHGMLDRGIAFGPSAY 397          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_HELAH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Helicobacter acinonychis (strain Sheeba) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25
Identity = 61/129 (47.29%), Postives = 84/129 (65.12%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT-YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            GLP+  +GGR +IM++++P G +YQAGTLSGNPLA+ AG+ TL ++K   T Y  LN +   LTQG+  + K    A+       MFGFFF E  V +F+DA KS+T  FA+ ++ ML +GVY A S F
Sbjct:  270 GLPLACFGGRAEIMDLLSPIGGVYQAGTLSGNPLAVCAGLSTLYKIKRDKTLYSRLNALAIRLTQGLKKSAKSYNIALQTLNRGSMFGFFFNENAVCDFDDALKSNTEMFAKFHQKMLFKGVYLACSSF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_FRATH (Glutamate-1-semialdehyde 2,1-aminomutase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25
Identity = 58/130 (44.62%), Postives = 82/130 (63.08%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG--PVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGR++IM+ V+PAGP+YQAGTLSGNP+AMTAGI TL+++ +PG ++ L     +L  G+ +A K          + GMFG FF      V  F D  K++   F + +  ML+ GVY APS +
Sbjct:  274 GMPVGAFGGRKEIMQKVSPAGPVYQAGTLSGNPIAMTAGIKTLEKISQPGFFDELGVKAQKLVDGLNEAAKAYDFNFHAKCLGGMFGLFFCSDKIAVNTFVDLGKTNLKMFNQFFAYMLDNGVYLAPSAY 403          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_AZOSB (Glutamate-1-semialdehyde 2,1-aminomutase OS=Azoarcus sp. (strain BH72) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV A+GGRRDIM  +AP GP+YQAGTLSG+P+A+ AG+ +L+  + PG Y+ L      L  G+    ++AG       I GMFG +F+     +F +   SD   F R +  ML+ G YFAPS F
Sbjct:  271 GMPVGAFGGRRDIMNCIAPLGPVYQAGTLSGSPVAVAAGLASLRLTQAPGFYDALAARARSLVDGLSGVAREAGVPFSADSIGGMFGIYFSPSVPASFAEVMASDREAFNRFFHAMLDAGHYFAPSAF 398          
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA_PSEPF (Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudomonas fluorescens (strain Pf0-1) GN=hemL PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.440e-25
Identity = 60/129 (46.51%), Postives = 74/129 (57.36%), Query Frame = 3
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT-EGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQF 395
            G+PV  +GG+R IME +AP GP+YQAGTLSGNPLAM AG+ TL+ +  PG +  L   T  L  G+      AG         GMFG +F+    +  FED   SD   F R +  MLE GVY APS F
Sbjct:  270 GMPVGCFGGKRLIMERIAPLGPVYQAGTLSGNPLAMAAGLTTLRLISRPGFHAELTDYTTRLLDGLQQRADAAGIPFVTTQAGGMFGLYFSGADDIVTFEDVMASDAALFGRFFHLMLEGGVYLAPSAF 398          
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA_FRATN1.430e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]
GSA_FRATF1.430e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]
GSA_FRAT11.430e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]
GSA_DICNV1.430e-2545.74Glutamate-1-semialdehyde 2,1-aminomutase OS=Dichel... [more]
GSA_RHOFD1.868e-2542.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Rhodof... [more]
GSA_NEIMA1.868e-2542.19Glutamate-1-semialdehyde 2,1-aminomutase OS=Neisse... [more]
GSA_HELAH1.868e-2547.29Glutamate-1-semialdehyde 2,1-aminomutase OS=Helico... [more]
GSA_FRATH1.868e-2544.62Glutamate-1-semialdehyde 2,1-aminomutase OS=Franci... [more]
GSA_AZOSB1.868e-2543.75Glutamate-1-semialdehyde 2,1-aminomutase OS=Azoarc... [more]
GSA_PSEPF2.440e-2546.51Glutamate-1-semialdehyde 2,1-aminomutase OS=Pseudo... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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