CX294368

Overview
NameCX294368
Unique NameCX294368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length426
Libraries
Library NameType
FlavSen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAW (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain MW2) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAT (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAS (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain MSSA476) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAR (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain MRSA252) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAN (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain N315) GN=hemL2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAM (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hemL2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAE (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain Newman) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAC (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain COL) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAAB (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
[Close]
BLAST of CX294368 vs. ExPASy Swiss-Prot
Match: GSA2_STAA9 (Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Staphylococcus aureus (strain JH9) GN=hemL2 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 3 
Query:   12 GLPVRAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSDTTKFARIYRGMLEEGVYFAPSQFRGW 404
            GLP+  YGGR+DIME VAP GP YQAGT++GNPL+M AGI  L+ L++ G YE L+ +  +L +G++   +K         I G    +FT+  V +++  + SD   F + ++ ML +G+  APS+F  W
Sbjct:  273 GLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAW 403
The following BLAST results are available for this feature:
BLAST of CX294368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSA2_STAAW5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAT5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAS5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAR5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAN5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAM5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAE5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAC5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAAB5.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]
GSA2_STAA95.435e-2541.22Glutamate-1-semialdehyde 2,1-aminomutase 2 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionC05015G12SK FlavSen1 Citrus clementina cDNA clone C05015G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294368 ID=CX294368; Name=CX294368; organism=Citrus clementina; type=EST; length=426bp
TTCGGCACGAGGGGCTGCCAGTTCGTGCTTATGGAGGAAGAAGGGATATT
ATGGAGATGGTGGCACCGGCAGGCCCAATGTACCAGGCTGGGACCTTAAG
TGGGAATCCATTGGCAATGACCGCTGGGATACACACCCTTAAACGATTGA
AGGAGCCAGGAACTTATGAATACTTGAATAAGATCACAGGTGAACTTACT
CAAGGCATCATTGATGCTGGAAAGAAAGCTGGGCATGCCATTTGTGGAGG
GTATATAAGTGGGATGTTTGGATTTTTCTTTACCGAAGGGCCTGTTTACA
ACTTCGAGGATGCAAAGAAGAGTGATACCACAAAGTTTGCAAGAATTTAC
AGGGGAATGCTGGAGGAAGGTGTATACTTCGCACCTTCACAGTTTAGAGG
CTGGGTTCACAAGCTTGGCACAATCA
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