CX294546

Overview
NameCX294546
Unique NameCX294546
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_NITEC (Chaperone protein htpG OS=Nitrosomonas eutropha (strain C91) GN=htpG PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11
Identity = 56/178 (31.46%), Postives = 82/178 (46.07%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLG----XXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMN-LQGK 524
            IDE    NL  Y  K+   I+K DLDLG                 F +    +K+ LG+ V  V+I+ RL+ SP  LV+     S N+ RL+K+       S  F+      EINP HP++Q L        D +       +L+D AL++ G   E+PA    ++ ++L  N L GK
Sbjct:  475 IDEWLTANLNEYAGKSLQSIAKGDLDLGKLEDEVEKQEHEKEAGDFQELTAKMKEVLGELVKDVRITYRLTESPACLVADTHDMSGNLGRLLKSAGQKVPDSKPFL------EINPHHPMVQRLKYEEAKFADWS------HILFDQALLAEGGQLEDPASFVRRLNDLLLQNILSGK 640          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_RHOSR (Chaperone protein htpG OS=Rhodococcus sp. (strain RHA1) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11
Identity = 46/172 (26.74%), Postives = 77/172 (44.77%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXX-----FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 503
            P+DE+ V  +  +  K+F  I+K ++DL                   F     W+   L ++V  V++S RL++SP  +V   F  S  +ER+ +A      S       +R+ E+NP HP++  L  A     +D       +LLY  AL++ G   E+PA   + +   L
Sbjct:  473 PVDEMWVGAVPEFDGKSFQSIAKGEVDLDTEEDKKAHESEREEQEKDFAGLLSWMADALSEQVKEVRLSTRLTTSPACIVGDAFSMSPALERMYRA------SGQPVPVTKRILELNPTHPLVTGLREAHGERNEDPALGETAELLYGMALLAEGGELEDPARFTTMLANRL 638          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_PELLD (Chaperone protein htpG OS=Pelodictyon luteolum (strain DSM 273) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 46/152 (30.26%), Postives = 69/152 (45.39%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXF-GQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALR-VVDLLYDAALVSSG 452
            P+D   + ++  Y +K    I K D+D                        ++ LG+ +  V  S+RL SSP  LVS K    + MER+MK          E   GR++ E+NP HPII+NL+       D+N  +R  +  LY+ AL+  G
Sbjct:  458 PVDVFVIPSIHEYDKKQLKSIEKADIDFSKATKDKTEPIAENLLVPLLKIFRETLGEGIEDVVESHRLVSSPVTLVSGKDAMDSQMERMMKMM------QQEMPAGRKILEVNPSHPIIRNLSGMMM-ANDNNPLIRTAIHQLYEGALLLEG 602          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_NOCFA (Chaperone protein htpG OS=Nocardia farcinica GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 47/182 (25.82%), Postives = 82/182 (45.05%), Query Frame = 3
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXX-----FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRV------VDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            P+DE+ V ++  +  K F  I+K ++DL                   F     W+ K L + +  V+++NRL++SP  LV   F ++  +ER+ +A      S       +R+ E+NP HP++  L  A      D D  +V       +LLY  A+++ G   ++PA     + + L   L
Sbjct:  477 PVDEMWVGSVPEFDGKRFQSIAKGEVDLESEEEKKASEALREQQDKEFADLLSWLGKTLEENIKEVRLTNRLTTSPACLVGDVFDFTPMLERMYRA------SGQPVPVSKRILELNPTHPLVTGLRDAYDQRKQDADEGKVPELTETAELLYGTAVLAEGGELKDPARFAHILTDRLTRTL 652          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_MARAV (Chaperone protein htpG OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 47/170 (27.65%), Postives = 81/170 (47.65%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXFGQ----TCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 503
            IDE  +  L  Y  K F D+++ DLDLG               +      + IK  L D+V  V+++NRL+ SP  LV  +F   A M+++M+A      +  +    + +FEIN +HP++Q L         +     +  +L+D A ++SG   ++P    S++  +L
Sbjct:  466 IDEWMMGYLSEYDGKQFQDVARGDLDLGEVETEEDKKHQEEAAKEHKDLLERIKTALEDQVQEVRVTNRLTDSPACLVVGQFDMGAQMKKIMEA------AGQKVPESKPIFEINVDHPLVQRLETEQ----GEQRFKELSAVLFDQATLASGEQLKDPGAYVSRLNRLL 625          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_COXBU (Chaperone protein htpG OS=Coxiella burnetii GN=htpG PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXX---FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 503
            +DE  V +L  ++ K+   I+K  LDLG                F +     K+ LG+K+  V+I++RL+ SP  +V  +   S +++RL+  QT       +FM+ + + EINP HP+I  +    KN  D     R  DLL + AL++ G   ++PA     + E+L
Sbjct:  472 VDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL-IQT-----GQDFMQAKPILEINPSHPLILRV----KNESDKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELL 630          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_COXBR (Chaperone protein htpG OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXX---FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 503
            +DE  V +L  ++ K+   I+K  LDLG                F +     K+ LG+K+  V+I++RL+ SP  +V  +   S +++RL+  QT       +FM+ + + EINP HP+I  +    KN  D     R  DLL + AL++ G   ++PA     + E+L
Sbjct:  472 VDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL-IQT-----GQDFMQAKPILEINPSHPLILRV----KNESDKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELL 630          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_COXBN (Chaperone protein htpG OS=Coxiella burnetii (strain Dugway 5J108-111) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11
Identity = 51/169 (30.18%), Postives = 84/169 (49.70%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXX---FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 503
            +DE  V +L  ++ K+   I+K  LDLG                F +     K+ LG+K+  V+I++RL+ SP  +V  +   S +++RL+  QT       +FM+ + + EINP HP+I  +    KN  D     R  DLL + AL++ G   ++PA     + E+L
Sbjct:  472 VDEWLVAHLNEFEGKSLQSIAKGTLDLGDLEKEEKVETEKFEKDFDELLKQFKEVLGEKIKDVRITHRLTDSPTCVVFDENEMSGHLQRLL-IQT-----GQDFMQAKPILEINPSHPLILRV----KNESDKTRFNRWADLLLNQALLAEGEQLKDPASFVKGLNELL 630          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_PSEPK (Chaperone protein htpG OS=Pseudomonas putida (strain KT2440) GN=htpG PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11
Identity = 45/170 (26.47%), Postives = 84/170 (49.41%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXFGQTCDWIKKR----LGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEML 503
            IDE  +  L  +  K FVDI++ DLDLG               +  + + +R    LGD VA V++S+RL+ SP +L   +      M ++++A      S  +    + +FE NP HP+I+ L+        ++    +  +L+D A +++G + ++PA    ++ ++L
Sbjct:  470 IDEWLMSYLNEFDGKAFVDIARGDLDLGKLDSEEDKKAQEEVAKDKEGLVERLKGALGDSVAEVRVSHRLTDSPAILAIGEQDLGLQMRQILEA------SGQKVPESKPIFEFNPSHPLIEKLDHEQ----SEDRFAELSHILFDQAALAAGDSLKDPAAYVRRLNKLL 629          
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HTPG_STRCO (Chaperone protein htpG OS=Streptomyces coelicolor GN=htpG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.928e-11
Identity = 41/160 (25.62%), Postives = 78/160 (48.75%), Query Frame = 3
Query:    6 IDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXXFGQT----CDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPA 473
            +DE+ V  +  Y+ K    ++K ++DL               G+       W+ + LG++V  V++S+RL+ SP  +VS     +  +E + +A         E    +R+ E+NPEH ++++LN A  +  D  +     +LL+  A+++ G  P+ PA
Sbjct:  471 VDEVWVDAVGEYEGKTLRSVAKGEIDLSGTEADKSDAEKEKQGEEYAGLLGWMTEHLGEEVKEVRLSSRLTVSPACVVSDAGELTPALENMYRAM------GQEVPGAKRILELNPEHQLVKSLNRAWTDRQDRAELTETAELLHALAVLAEGGRPKEPA 624          
The following BLAST results are available for this feature:
BLAST of CX294546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
HTPG_NITEC1.560e-1131.46Chaperone protein htpG OS=Nitrosomonas eutropha (s... [more]
HTPG_RHOSR2.661e-1126.74Chaperone protein htpG OS=Rhodococcus sp. (strain ... [more]
HTPG_PELLD3.475e-1130.26Chaperone protein htpG OS=Pelodictyon luteolum (st... [more]
HTPG_NOCFA3.475e-1125.82Chaperone protein htpG OS=Nocardia farcinica GN=ht... [more]
HTPG_MARAV3.475e-1127.65Chaperone protein htpG OS=Marinobacter aquaeolei (... [more]
HTPG_COXBU3.475e-1130.18Chaperone protein htpG OS=Coxiella burnetii GN=htp... [more]
HTPG_COXBR3.475e-1130.18Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_COXBN3.475e-1130.18Chaperone protein htpG OS=Coxiella burnetii (strai... [more]
HTPG_PSEPK4.539e-1126.47Chaperone protein htpG OS=Pseudomonas putida (stra... [more]
HTPG_STRCO5.928e-1125.63Chaperone protein htpG OS=Streptomyces coelicolor ... [more]

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Properties
Property NameValue
Genbank descriptionC05054A06SK FlavRip1 Citrus clementina cDNA clone C05054A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294546 ID=CX294546; Name=CX294546; organism=Citrus clementina; type=EST; length=673bp
ATCCCATCGATGAGATTGCGGTCCAGAACCTGAAATCGTATAAGGAGAAG
AATTTTGTCGACATTAGCAAGGAAGACTTGGATTTAGGTGAAAAGAATGA
GGAAAAAGAGAAGGTGATGAAGGAAGAGTTTGGCCAAACTTGTGATTGGA
TTAAGAAGCGATTGGGTGACAAAGTAGCTAGTGTTCAAATCTCAAATCGT
CTGAGCTCATCACCCTGTGTTCTGGTTTCTGCTAAGTTTGGTTGGTCAGC
CAACATGGAGAGGTTAATGAAGGCTCAAACAGTTGGTGATACCTCAAGTA
TGGAGTTCATGAGAGGAAGAAGAGTGTTTGAGATTAATCCTGAACACCCC
ATCATTCAAAACCTGAATGCTGCAAGCAAAAATTGCCCGGATGACAATGA
TGCCCTTCGAGTTGTAGATTTATTGTATGATGCAGCTCTGGTCTCTAGTG
GATTTACTCCTGAGAATCCGGCAGAGCTTGGCAGCAAGATATATGAAATG
TTAGGCATGAATTTACAAGGTAAATGGTCAGTTCCAGATGCTGCTGAGGT
TCAGCATCCAACAGCAACCCAATCACAGACCTCCCAACTTACGAAGCTGA
GGTGGTCGAGCCAGCAGAAGCCGGTGGTCAGAAATGAGGAGCTCACATTT
TTCCTTTTTCTGTCCTTATTTAG
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