CX294546

Overview
NameCX294546
Unique NameCX294546
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 9.726e-30
Identity = 68/173 (39.31%), Postives = 104/173 (60.12%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK +  K+ V ++KE L+L                F   C  +K+ L  KV  V +SNRL SSPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+HPI++ L   ++   +D     +V LL++ AL+SSGF+ ++P    ++IY M+ + L
Sbjct:  515 PIDEYCVQQLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCKLMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDKAVKDLVILLFETALLSSGFSLDDPQTHSNRIYRMIKLGL 687
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP90_BRUPA (Heat shock protein 90 OS=Brugia pahangi GN=HSP90 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.270e-29
Identity = 71/173 (41.04%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK Y  K  V ++KE L+L                F   C  +K  L  KV  V +SNRL SSPC +V++++GWSANMER+MKAQ + D+S+M +M  ++  EINP+H +I+ L    +   +D     +V LL++ AL+SSGF+ E+P    S+IY M+ + L
Sbjct:  506 PIDEYCVQQLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDILEKKVEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSGFSLEDPQLHASRIYRMIKLGL 678
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HSP90_CAEBR (Heat shock protein 90 OS=Caenorhabditis briggsae GN=daf-21 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.659e-29
Identity = 70/173 (40.46%), Postives = 101/173 (58.38%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDLGXXXXXXXXXXXXX--FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK Y  K  V ++KE L+L                +   C  IK  L  K+  V +SNRL SSPC +V++++GWSANMER+MKAQ + D+S+M +M  ++  EINP+H I++ L    +   +D     +V LL++ AL+SSGF+ E P    S+IY M+ + L
Sbjct:  498 PIDEYCVQQLKEYDGKKLVSVTKEGLELPETEEEKKKFEEDKVAYENLCKVIKDILEKKIEKVAVSNRLVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHAIMKTLRERVEADKNDKTVKDLVVLLFETALLSSGFSLEEPQSHASRIYRMIKLGL 670
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  525 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 697
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  525 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 697
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  525 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 697
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  525 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 697
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  525 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 697
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  524 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 696
[Close]
BLAST of CX294546 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.167e-29
Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = 3 
Query:    3 PIDEIAVQNLKSYKEKNFVDISKEDLDL--GXXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTPENPAELGSKIYEMLGMNL 515
            PIDE  VQ LK ++ K  V ++KE L+L                F   C  +K  L  KV  V +SNRL +SPC +V++ +GW+ANMER+MKAQ + D S+M +M  ++  EINP+H II+ L   ++   +D     +V LLY+ AL+SSGF+ E+P    ++IY M+ + L
Sbjct:  514 PIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGL 686
The following BLAST results are available for this feature:
BLAST of CX294546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
HS90B_DANRE9.726e-3039.31Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HSP90_BRUPA1.270e-2941.04Heat shock protein 90 OS=Brugia pahangi GN=HSP90 P... [more]
HSP90_CAEBR1.659e-2940.46Heat shock protein 90 OS=Caenorhabditis briggsae G... [more]
HS90A_RAT2.167e-2939.88Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG2.167e-2939.88Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR2.167e-2939.88Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MOUSE2.167e-2939.88Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_MACFA2.167e-2939.88Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN2.167e-2939.88Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_HORSE2.167e-2939.88Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]

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Properties
Property NameValue
Genbank descriptionC05054A06SK FlavRip1 Citrus clementina cDNA clone C05054A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294546 ID=CX294546; Name=CX294546; organism=Citrus clementina; type=EST; length=673bp
ATCCCATCGATGAGATTGCGGTCCAGAACCTGAAATCGTATAAGGAGAAG
AATTTTGTCGACATTAGCAAGGAAGACTTGGATTTAGGTGAAAAGAATGA
GGAAAAAGAGAAGGTGATGAAGGAAGAGTTTGGCCAAACTTGTGATTGGA
TTAAGAAGCGATTGGGTGACAAAGTAGCTAGTGTTCAAATCTCAAATCGT
CTGAGCTCATCACCCTGTGTTCTGGTTTCTGCTAAGTTTGGTTGGTCAGC
CAACATGGAGAGGTTAATGAAGGCTCAAACAGTTGGTGATACCTCAAGTA
TGGAGTTCATGAGAGGAAGAAGAGTGTTTGAGATTAATCCTGAACACCCC
ATCATTCAAAACCTGAATGCTGCAAGCAAAAATTGCCCGGATGACAATGA
TGCCCTTCGAGTTGTAGATTTATTGTATGATGCAGCTCTGGTCTCTAGTG
GATTTACTCCTGAGAATCCGGCAGAGCTTGGCAGCAAGATATATGAAATG
TTAGGCATGAATTTACAAGGTAAATGGTCAGTTCCAGATGCTGCTGAGGT
TCAGCATCCAACAGCAACCCAATCACAGACCTCCCAACTTACGAAGCTGA
GGTGGTCGAGCCAGCAGAAGCCGGTGGTCAGAAATGAGGAGCTCACATTT
TTCCTTTTTCTGTCCTTATTTAG
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