CX294547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: MSI1_ARATH (WD-40 repeat-containing protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.538e-14 Identity = 47/181 (25.97%), Postives = 85/181 (46.96%), Query Frame = 2 Query: 44 FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGST---MIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF-------MVEDA------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 FK H V + W+ RH +F S D L IWD+R ++ + AH E+ +N +++ ++A+ S DK++K++D+R + + H V +V ++P +LASC + +WD VEDA L+ + HT + + +++S D ++ +WQ Sbjct: 223 FKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQ 403
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB2_HUMAN (WD repeat and SOCS box-containing protein 2 OS=Homo sapiens GN=WSB2 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14 Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL-----------VEGL-LASTGWDELVYVW 535 +K+W V + H V + ++ P S + SAS D TLRIWD+ + G + + + + + C D ++ SA+ +KS+ +W +R+Y + I L GH +V FSP LL + SYD V +WD + L R HHT+ +D S + EGL LA+ D L+ +W Sbjct: 135 IKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFSPDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIW 320
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: MSI1_SOLLC (WD-40 repeat-containing protein MSI1 OS=Solanum lycopersicum GN=MSI1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 4.621e-14 Identity = 49/185 (26.49%), Postives = 88/185 (47.57%), Query Frame = 2 Query: 32 SVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP---AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF-------MVEDA------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 +++ FK H V + W+ RH +F S D L +WD+R T I AH+ E+ +N +++ ++A+ S DK++K++D+R + L+ H V +V ++P +LASC + +WD EDA L+ + HT + + ++AS D ++ +WQ Sbjct: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLHVWDLRTPSVTKPIQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKISTALHTLDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQ 403
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB2_BOVIN (WD repeat and SOCS box-containing protein 2 OS=Bos taurus GN=WSB2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.036e-14 Identity = 58/190 (30.53%), Postives = 91/190 (47.89%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVL-----------VEGL-LASTGWDELVYVW 535 +K+W V + H V + ++ P S + SAS D TLRIWD+ + G + + + + + C D ++ SA+ +KS+ +W +R+Y + I L GH +V FSP LL + SYD V +WD + L R HHT+ +D S + EGL LA+ D L+ +W Sbjct: 137 IKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFSPDSA-LLVTASYDTNVIMWDPYTGERL--RSLHHTQLNPPMDDSDVHISSLRSVCFSPEGLYLATVADDRLLRIW 322
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB2_MOUSE (WD repeat and SOCS box-containing protein 2 OS=Mus musculus GN=Wsb2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.883e-14 Identity = 60/190 (31.58%), Postives = 92/190 (48.42%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVD-----MSVL------VEGL-LASTGWDELVYVW 535 +K+W V + H V + ++ P S + SAS D TLRIWD+ + G + + + + + C D ++ SA+ +KS+ +W +R+Y + I L GH +V FSP LL + SYD +V +WD L R HHT+ +D MS L EGL LA+ D L+ +W Sbjct: 135 IKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTL-IRKLEGHQSSVVSCDFSPDSA-LLVTASYDTSVIMWDPYTGARL--RSLHHTQLEPTMDDSDVHMSSLRSVCFSPEGLYLATVADDRLLRIW 320
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WDR38_HUMAN (WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.030e-13 Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 2 Query: 101 VFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 +F SAS DCT+R+WDV ++ H+ + ++ D +AS DK + +WDV++ ++ + +L GH +++ FSP N LA+ S+D TV +WD + V A + GLLAS WD+ +++W+ Sbjct: 77 LFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSP-DSRQLASGGWDKRVMLWDVQSGQM-LRLLVGHRDSIQSSDFSP-TVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGLLASGSWDKTIHIWK 219
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.345e-13 Identity = 61/179 (34.08%), Postives = 87/179 (48.60%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFC-SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V +W V +P + + H V +N V S SG +LR+WD+ + H+ I + D++ + L AS SVD +IK+WDVR + + GH AVR + FSP + LAS S D TV LWD ++ ++ + HT AV V E LLAS D V +W Sbjct: 45 VNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSG--SLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYL-ASGSVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGK-WLASASDDSTVKLWD-LIAGKMITEFTSHTS-AVNVVQFHPNEYLLASGSADRTVKLW 216
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: YY46_ANASP (Uncharacterized WD repeat-containing protein alr3466 OS=Anabaena sp. (strain PCC 7120) GN=alr3466 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.995e-13 Identity = 55/178 (30.90%), Postives = 88/178 (49.44%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V+LW + ++TFK H V + ++P +S + S S D T+R+WD+ I H + + +N D ++A+ S D+++++WD+ + + + GH VR V FS +LAS S D TV LWD + L HT V S +LAS G D++V +W Sbjct: 930 VRLWDISSGQCLKTFKGHTSRVRSVVFSP-NSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFN-LDGSMLATGSGDQTVRLWDISSSQC-FYIFQGHTSCVRSVVFSSDGA-MLASGSDDQTVRLWDISSGNCLY-TLQGHTSCVRSVVFSP-DGAMLASGGDDQIVRLW 1101 HSP 2 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 V+LW + + T + H V ++P + + S SGD T+R+WD+ I+ H + + +N D +AS S D+++++W++ + + + GH V V F+P ++LAS S D TV LWD L + HT + V + +LAS D+ V +W+ Sbjct: 1140 VRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATL-ASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEINSSKC-LCTFQGHTSWVNSVVFNPD-GSMLASGSSDKTVRLWDISSSKCL-HTFQGHTNWVNSVAFNP-DGSMLASGSGDQTVRLWE 1312 HSP 3 Score: 67.0106 bits (162), Expect = 8.157e-11 Identity = 52/180 (28.89%), Postives = 84/180 (46.67%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL--VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V+LW + + F+ H VY+ +N S + + SGD T+R+WD+ I H + + ++ D ++AS S D+++++WD+ + + L GH VR V FSP +LAS D V LWD + L + Y F V V LA+ D++V +W Sbjct: 972 VRLWDISSGECLYIFQGHTGWVYSVAFNLDGS-MLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSS-DGAMLASGSDDQTVRLWDISSGNC-LYTLQGHTSCVRSVVFSPDGA-MLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGV----TLANGSSDQIVRLW 1143
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.995e-13 Identity = 46/182 (25.27%), Postives = 83/182 (45.60%), Query Frame = 2 Query: 44 FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM---IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAV-RKVKFSPHRRNLLASCSYDMTVCLWDF-------MVEDA------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 F H+ V + W+ H +F S + D L +WD R ++ ++ AH E+ +N Y + ++A+ S DK++ +WD+RN ++ + H + + V +SPH +LAS D + +WD EDA L+ + HT + ++ S D ++ +WQ Sbjct: 222 FTGHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQ 403
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: KTNB1_XENTR (Katanin p80 WD40-containing subunit B1 OS=Xenopus tropicalis GN=katnb1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.995e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V LW+V++P + + H V + +N ++ + S +LR+WD+ + H+ + + D++ Y D +AS S+D +IK+WDVR + + GH AVR ++FSP + LAS S D +V LWD + +H + V + E LLAS D V W Sbjct: 45 VNLWSVNKPNCIMSLTGHTTPVESVRFN-NAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGD-FVASGSLDTNIKLWDVRR-KGCVFRYKGHTQAVRCLRFSPDGK-WLASASDDHSVKLWDLTAGKMMAELSEH--KGPVNIIEFHPNEYLLASGSADRTVRFW 216 The following BLAST results are available for this feature:
BLAST of CX294547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294547 ID=CX294547; Name=CX294547; organism=Citrus clementina; type=EST; length=599bpback to top |