CX294547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13 Identity = 53/179 (29.61%), Postives = 87/179 (48.60%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH-HTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 VK++ V V+T K H V+ +NP + + S S D T+RIW R + IP HE + + +N+ D +AS S D ++IWD +++ + VKFSP+ + +LAS + + T+ LWD+ L H ++++ V + SV + S D VY+W Sbjct: 172 VKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGT-LIASGSFDETIRIWCARNGNTIFSIPGHEDPVSSVCFNR-DGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHPPITHVKFSPNGKYILAS-NLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIW 347
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: GRWD1_HUMAN (Glutamate-rich WD repeat-containing protein 1 OS=Homo sapiens GN=GRWD1 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.912e-13 Identity = 43/142 (30.28%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 11 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII----PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR--VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 418 W VD+ R F H V + W+P + VF S S D ++RIWD+R S + AH+ ++ W++ + L+ S D ++KIWD+R ++ P+A H V V++ P + A+ D + WD VE Sbjct: 250 WHVDQ----RPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWDLAVE 386
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.109e-13 Identity = 57/176 (32.39%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 8 LWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 LW + H V + ++P H ++ SAS D T+R+W + G AH + + D++ D +A+AS DKSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD V + FA VD + +AS G D+ V VW Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVW 213
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.109e-13 Identity = 57/176 (32.39%), Postives = 83/176 (47.16%), Query Frame = 2 Query: 8 LWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 LW + H V + ++P H ++ SAS D T+R+W + G AH + + D++ D +A+AS DKSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD V + FA VD + +AS G D+ V VW Sbjct: 44 LWNFKPHARAYRYVGHKDVVTSVQFSP-HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSA-DGQFLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVW 213
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: KTNB1_XENLA (Katanin p80 WD40-containing subunit B1 OS=Xenopus laevis GN=katnb1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.715e-13 Identity = 54/178 (30.34%), Postives = 87/178 (48.88%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V LW+V++P + + H V + +N ++ + S +LRIWD+ + H+ + + D++ Y + +AS S+D +IK+WDVR + + GH AVR ++FSP + LAS S D +V LWD + +H + V + E LLAS D V W Sbjct: 45 VHLWSVNKPNCIMSLTGHTTPVESVRFN-NSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGE-FVASGSLDTNIKLWDVRR-KGCVFRYKGHTQAVRCLRFSPDGK-WLASASDDHSVKLWDLTAGKMMAELSEH--KGPVNIIEFHPNEYLLASGSADRTVRFW 216
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: GRWD1_RAT (Glutamate-rich WD repeat-containing protein 1 OS=Rattus norvegicus GN=Grwd1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.715e-13 Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 11 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM-GSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR--VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 418 W VD+ R F H V + W+P VF S S D ++RIWD+R G ++ AH+ ++ W++ + L+ S D ++K+WD+R ++ P+A H V V++ P + A+ D + WD VE Sbjct: 249 WNVDQ----RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFLL-SGGDDGTLKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVE 385
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: GRWD1_MOUSE (Glutamate-rich WD repeat-containing protein 1 OS=Mus musculus GN=Grwd1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 8.715e-13 Identity = 42/142 (29.58%), Postives = 69/142 (48.59%), Query Frame = 2 Query: 11 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREM-GSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR--VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 418 W VD+ R F H V + W+P VF S S D ++RIWD+R G ++ AH+ ++ W++ + L+ S D ++K+WD+R ++ P+A H V V++ P + A+ D + WD VE Sbjct: 250 WNVDQ----RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHMAPVTSVEWHPQDSGVFAASGADNQITQWDLAVE 386
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: GRWD1_BOVIN (Glutamate-rich WD repeat-containing protein 1 OS=Bos taurus GN=GRWD1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.138e-12 Identity = 42/142 (29.58%), Postives = 68/142 (47.89%), Query Frame = 2 Query: 11 WTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII----PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYR--VPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE 418 W VD+ R F H V + W+P VF S S D ++RIWD+R S + AH+ ++ +W+ + L+ S D ++K+WD+R ++ P+A H V V++ P + A+ D + WD VE Sbjct: 250 WHVDQ----RPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVE 386
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB1_XENTR (WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis GN=wsb1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.487e-12 Identity = 44/136 (32.35%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 406 +K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++ H+ + C ++ D ++ S K++ +WD+ Y + I L+GH V +FSP LLA+ SYD V +WD Sbjct: 152 IKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYCCAFSP-DSSMLCSVGAGKAVFLWDMDKYTM-IRKLDGHYNDVVACEFSPDGA-LLATASYDTRVYVWD 284
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WD51B_MOUSE (WD repeat-containing protein 51B OS=Mus musculus GN=Wdr51b PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.487e-12 Identity = 56/181 (30.94%), Postives = 87/181 (48.07%), Query Frame = 2 Query: 8 LWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMD 550 LW++ + H V + ++P+ ++ SAS D T+R+W + G + AH + + D++ D L+ +AS DKSIK+W + R + L H + VR KFSP R L+ SCS D T+ +WD V + FA VD + +AS G D V +W M+ Sbjct: 44 LWSLKPHARAYRYVGHKDVVTSLQFSPQ-GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSA-DGQLLVTASEDKSIKVWSMFRQRF-LYSLYRHTHWVRCAKFSPDGR-LIVSCSEDKTIKIWD-TTNKQCVNNFSDSVGFANFVDFNP-NGTCIASAGSDHAVKIWDIRMN 218 The following BLAST results are available for this feature:
BLAST of CX294547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294547 ID=CX294547; Name=CX294547; organism=Citrus clementina; type=EST; length=599bpback to top |