CX294547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.487e-12 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V LW++++P + + H V + N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++ + HT V V E LLAS D + W Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.487e-12 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWN-PRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V LW++++P + + H V + N P V S SG ++R+WD+ + H+ I + D++ Y + +AS S D +IK+WD+R + + GH AVR ++FSP + LAS + D TV LWD + ++ + HT V V E LLAS D + W Sbjct: 45 VNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSG--SIRVWDLEAAKILRTLMGHKANICSLDFHPYGE-FVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGK-WLASAADDHTVKLWD-LTAGKMMSEFPGHTG-PVNVVEFHPNEYLLASGSSDRTIRFW 216
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB1_HUMAN (WD repeat and SOCS box-containing protein 1 OS=Homo sapiens GN=WSB1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.942e-12 Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 406 +K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ M ++ H+ + +C ++ D ++ S K++ +W++ Y + I L GH + V FSP LLA+ SYD V +WD Sbjct: 152 IKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSP-DSSMLCSVGASKAVFLWNMDKYTM-IRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYIWD 284
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.942e-12 Identity = 53/179 (29.61%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE-FAVGVDMSVLVEGLLASTGWDELVYVW 535 +KLW V ++T K H+ V+ +NP S++ S S D T++IW+V+ + AH + A +N LI S S D +IWD + + +++ V VKFSP+ + +L + + D T+ LWD+ L H E + + + SV + S D LVY+W Sbjct: 107 LKLWDVRSGKCLKTLKGHSNYVFCCNFNPP-SNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFN-CSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYIL-TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 282
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: MSI2_ARATH (WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana GN=MSI2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.942e-12 Identity = 33/121 (27.27%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 44 FKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 406 ++ H + + +W+ ++ ++F SA D L IWD R + HE E+ +N +++ ++A+AS D ++ ++D+R P+ V++ H V +V++ P+ +LAS D + +WD Sbjct: 213 YEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWD 333
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.312e-12 Identity = 57/181 (31.49%), Postives = 87/181 (48.07%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL-VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQ 541 V +W V S+ ++EH ++ ++ + S S DC +++W R+ S + I + I +N IA S D I +D+RN P+ V +GH AV VKF + N LAS S D T+ LWD V+D L V + HT V ++V E L + +E VYV+ + Sbjct: 445 VTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDM-KANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSN--NELASASTDSTLRLWD--VKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNE-VYVYHK 619
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12 Identity = 52/179 (29.05%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE-FAVGVDMSVLVEGLLASTGWDELVYVW 535 +KLW + ++T K H+ V+ +NP S++ S S D T++IW+V+ + AH + A +N LI S S D +IWD + + +++ V VKFSP+ + +L + + D T+ LWD+ L H E + + + SV + S D LVY+W Sbjct: 107 LKLWDMRSGKCLKTLKGHSNYVFCCNFNPP-SNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFN-CSGSLIVSGSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNGKYIL-TATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 282
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: HAT2_ASHGO (Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii GN=HAT2 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.325e-12 Identity = 57/200 (28.50%), Postives = 95/200 (47.50%), Query Frame = 2 Query: 2 VKLWTVD---RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR-EMGSTMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF-------MVEDA------LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGM 547 V LW ++ +P S+ T H V + W+ S+VF + S D TL++ D R + +P A F L+ ++K+ L+A+A VD I ++D+R+ P+ V++GH +V V+FSPH ++ S D +WD +DA L+ + H + + LLAST D ++ W+ M Sbjct: 211 VALWDIEAAKKPKSILT--SHDDIVNDVKWHEFESNVFGTVSEDKTLQVHDKRVRLEPVKKLPTASPFNTLS--FSKHSRNLLAAAGVDSQIYLYDMRDMSSPLHVMSGHQDSVTTVEFSPHTDGIICSSGSDRRAIIWDLTQIGAEQSQDDADDGAPELMMMHAGHRSPVNEFSFNPQIPWLLASTEEDNVIQAWKVSM 406
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: NUDF_ASPOR (Nuclear distribution protein nudF homolog OS=Aspergillus oryzae GN=nudF PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.649e-12 Identity = 56/173 (32.37%), Postives = 84/173 (48.55%), Query Frame = 2 Query: 26 PTSVR-TFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWN-KYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVW 535 P++VR + + H V ++P S + S S DCT++IWD + H + D+ D+ L+AS S D SIK+W + I L GH + V V+F P RNLL S S D + +WD + V + HT++ D+S+ +G L STG D +W Sbjct: 104 PSTVRYSLESHRDKVNCVAFHPTFSSI-ASGSDDCTIKIWDWELGELERTLKGHTRAVRDVDYGGPRDNVLLASCSSDLSIKLWKPTDNYKNIRTLQGHDHIVSAVRFIP-SRNLLVSASRDNDMRIWD-VTTGYCVKTINGHTDWV--RDVSISFDGRFLFSTGQDMTARLW 271
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: SPG16_MOUSE (Sperm-associated antigen 16 protein OS=Mus musculus GN=Spag16 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 409 +KLW +++ T + H + V++ TW+ D SAS D T +IWDV + H + + ++ + + L+ +AS DK++ +WD R + + L GH ++V F+P R +++ASC LWDF Sbjct: 426 IKLWDLNKGECTLTLEGHNHAVWSCTWH-SCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILL-TASADKTLSVWDARTGKCEQS-LYGHMHSVNDATFTP-RGHIIASCDARGVTKLWDF 557 HSP 2 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 110 SASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDH 445 ++SGD T+++WD+ + T+ + H + +C W+ D +ASAS+D + KIWDV + R L GH +V ++F P N+L + S D T+ +WD Y H Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGD-FVASASLDMTSKIWDVNSERCRY-TLYGHTDSVNSIEFFPF-SNILLTASADKTLSVWDARTGKCEQSLYGH 527 The following BLAST results are available for this feature:
BLAST of CX294547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294547 ID=CX294547; Name=CX294547; organism=Citrus clementina; type=EST; length=599bpback to top |