CX294547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: PFS2_EMENI (Polyadenylation factor subunit 2 OS=Emericella nidulans GN=pfs2 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.378e-12 Identity = 50/149 (33.56%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 2 VKLWTVDRPT--SVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF-MVEDALVGR 436 VK W RP +V T + H V + W+P + F SAS D TL+I+D ++ H +++ +CDW+ L+ S S D +K WD R R + L+ H V KFS NLLA+ S D T ++D M+ D + R Sbjct: 137 VKYW---RPNFNNVETIDDAHHDAVRDLAWSPSDTK-FLSASDDTTLKIYDFTARTCDTVLTGHNWDVKSCDWHPTKG-LLVSGSKDHQVKFWDPRTARC-LTTLHSHKNTVTATKFSRVNNNLLATSSRDQTARVFDLRMMRDICILR 279
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: RCO1_NEUCR (Transcriptional repressor rco-1 OS=Neurospora crassa GN=rco-1 PE=4 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 9.636e-12 Identity = 51/197 (25.89%), Postives = 92/197 (46.70%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVP-IAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDAL-----------VGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQQGMDPR 556 +++W + T TF H +Y+ ++ R S SGD T+R+WD+ +T ++ + D +A+ S+DKS+++WD+R Y + +GH +V V FSP RNL+ S S D T+ +W+ + + ++ H +F + V ++ + +L+ + D V W DPR Sbjct: 368 IRVWDIQSRTIRNTFHGHEQDIYSLDFS-RDGRTIASGSGDRTVRLWDIETGQNTSVLSIEDGVTTVAI--SPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSPDGRNLV-SGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSK-DRGVQFW----DPR 555
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: PFS2_ASPOR (Polyadenylation factor subunit 2 OS=Aspergillus oryzae GN=pfs2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.636e-12 Identity = 48/149 (32.21%), Postives = 75/149 (50.34%), Query Frame = 2 Query: 2 VKLWTVDRPT--SVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF-MVEDALVGR 436 +K W RP +V T + H V + W+P + F SAS D TL+I+D + ++ H +++ +CDW+ L+ S S D +K WD R R + L+ H V +FS +NLLA+ S D T ++D M+ D + R Sbjct: 168 IKYW---RPNFNNVETIDDAHHDAVRDLAWSPSDTK-FLSASDDTTLKIFDFTSRTADTVLTGHNWDVKSCDWHPTKG-LLVSGSKDHQVKFWDPRTARC-LTTLHSHKNTVTATRFSRVNQNLLATSSRDQTARVFDLRMMRDICILR 310
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB1_MOUSE (WD repeat and SOCS box-containing protein 1 OS=Mus musculus GN=Wsb1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 43/136 (31.62%), Postives = 74/136 (54.41%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTM-IIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 406 +K+W V + +H V + T+ P S + SAS D TLR+WD+++ G+ + ++ AH+ + +C ++ D ++ S K++ +W++ Y + I L GH + V FSP LLA+ SYD V +WD Sbjct: 152 IKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVLRAHQNWVYSCAFSP-DCSMLCSVGASKAVFLWNMDKYTM-IRKLEGHHHDVVACDFSPDGA-LLATASYDTRVYVWD 284
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: MSI4_ARATH (WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 53 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGS--TMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRV-----PIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 409 H V + ++P + FCS D L +WD R + T + AH+ ++ DWN +DD LI + S D +++++D R PI GH AV V++SP + ++ S + D + +WD+ Sbjct: 291 HEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 416
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.258e-11 Identity = 53/184 (28.80%), Postives = 81/184 (44.02%), Query Frame = 2 Query: 38 RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR--EMGSTMIIP--AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFM----------VEDA---LVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 R + H++ V + +P + S D TL+I DVR E I+ H I A +N + +IA+AS DK+I IWD+RN + + L GH AV +++ P +L S SYD + WD ED L+ + HT + L+ S D L+ +W+ Sbjct: 235 RKYTHHSHIVNDVQHHPLVKSWIGTVSDDLTLQIIDVRRPETDKAAIVARNGHSDAINALAFNPRVETIIATASADKTIGIWDMRNMKSKVHTLEGHQDAVTSLEWHPTESAILGSGSYDRRLLFWDISRVGDEQTQDDAEDGPPELLFMHGGHTNHLADFSWNRNDPWLVCSAAEDNLLQIWK 418
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: PFS2_ASPFU (Polyadenylation factor subunit 2 OS=Aspergillus fumigatus GN=pfs2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.147e-11 Identity = 48/149 (32.21%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 2 VKLWTVDRPT--SVRTFKE-HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF-MVEDALVGR 436 +K W RP +V T + H V + W+P + F SAS D TL+I+D + ++ H +++ +CDW+ L+ S S D +K WD R R + L+ H V +FS NLLA+ S D T ++D M+ D + R Sbjct: 75 IKYW---RPNFNNVETIDDAHHDAVRDLAWSPSDTK-FLSASDDTTLKIFDFTARTADTVLTGHNWDVKSCDWHPTKG-LLVSGSKDHQVKFWDPRTARC-LTTLHSHKNTVTTTRFSRVNSNLLATSSRDQTARVFDLRMMRDICILR 217
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.804e-11 Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 2 Query: 23 RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVE---DALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 RP H C+ + ++P S + SAS D T+++WD + H + D++K + L+AS S D +IK+WD + Y + L+GH + V V+F+P L++S S D T+ +W+ LVG D + V D S +AS D+ + W Sbjct: 95 RPPEKHILTGHRNCINSVKFHPSFS-LMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN-LLASCSADLTIKLWDFQTYDC-VKTLHGHDHNVSCVRFTPSGDQLISS-SRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGS-----CIASCSNDQTIKTW 259
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: HAT2_ENCCU (Histone acetyltransferase type B subunit 2 OS=Encephalitozoon cuniculi GN=HAT2 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.804e-11 Identity = 51/185 (27.57%), Postives = 81/185 (43.78%), Query Frame = 2 Query: 26 PTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIP-AHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGR-------------YDHHTEFAVGVDMSVLVEGLLASTGWDELVYVWQ 538 PT V + H V + ++ + SA + +WD R I AH +IL+ ++ D +IA++S D S+K+WD R+ P+ +L GH V V++SPH +LAS S D V +WD A V + HT + + +AS D ++ +WQ Sbjct: 197 PTVV--LRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRSLSQPLHILLGHSKDVVSVEWSPHNDKVLASGSTDRRVIVWDLGQAGAEVPEEYKAEGPPEMKFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIWQ 379
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: CIAO1_CANGA (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Candida glabrata GN=CIA1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.804e-11 Identity = 48/131 (36.64%), Postives = 64/131 (48.85%), Query Frame = 2 Query: 53 HAYCVYNATWNPRHSDVFCSASGDCTLRIWDVR----------EMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDV----RNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLW 403 H V + W P HSD+ + S D T+ IW EM II HE E+ W++ D CL+A+ S DKS+ IW+ Y I+VL H V+ V + + NLLAS SYD TV +W Sbjct: 58 HKKAVRSVAWRP-HSDLLAAGSFDSTISIWTQSDLDLEEGAKLEMELLAIIEGHENEVKGISWSQ-DGCLLATCSRDKSVWIWETDEAGEEYEC-ISVLQEHSQDVKHVVWHT-KHNLLASSSYDDTVRIW 184 The following BLAST results are available for this feature:
BLAST of CX294547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294547 ID=CX294547; Name=CX294547; organism=Citrus clementina; type=EST; length=599bpback to top |