CX294547
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WSB1_DANRE (WD repeat and SOCS box-containing protein 1 OS=Danio rerio GN=wsb1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.662e-11 Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWD 406 +K+W V + +H V + T+ P S V SAS D TLR+WD+++ G+ + + + C D ++ S K++ +WD+ Y + I L GH V +FSP LLA+ SYD V +WD Sbjct: 153 IKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVLRGHQNWVYCSAFSPDSSVLCSVGAGKAVFLWDMDKYTL-IRKLEGHHNDVVCCEFSPDGA-LLATASYDTRVIVWD 285
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: TBL1R_MOUSE (F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus GN=Tbl1xr1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 20 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 439 DRP ++TF+ H V W+P ++ S S D TL+IW +++ + AH EI W N + ++ASAS D ++++WDV + + I L H V V FSP R LAS S+D V +W+ ALV Y Sbjct: 339 DRP--IKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: TBL1R_HUMAN (F-box-like/WD repeat-containing protein TBL1XR1 OS=Homo sapiens GN=TBL1XR1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 50/148 (33.78%), Postives = 73/148 (49.32%), Query Frame = 2 Query: 20 DRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDW--------NKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRY 439 DRP ++TF+ H V W+P ++ S S D TL+IW +++ + AH EI W N + ++ASAS D ++++WDV + + I L H V V FSP R LAS S+D V +W+ ALV Y Sbjct: 339 DRP--IKTFQGHTNEVNAIKWDPT-GNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAFSPDGR-YLASGSFDKCVHIWNTQT-GALVHSY 480
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: NUDF_EMENI (Nuclear distribution protein nudF OS=Emericella nidulans GN=nudF PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 57/190 (30.00%), Postives = 89/190 (46.84%), Query Frame = 2 Query: 23 RPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWN-KYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEG-LLASTGWDELVYVWQ-QGMDPRAV*YLLGRD 583 +P+S T H V ++P + + S S DCT++IWD + H + D+ + + L+AS S D +IK+WD I L+GH ++V V+F N L S S D T+ +WD + V TE + D+S +G L S G D+ + VW+ +P+A LLG + Sbjct: 103 KPSSTHTLTSHRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD-VSTGFCVKVIKSATESWIR-DVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAA--LLGHE 287
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 50/178 (28.09%), Postives = 81/178 (45.51%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTEFAVGVDMSVLVEGLLASTGWDELVYVW 535 V LW V + + + H V + +N ++ + S T++I+D+ + H I D++ + + +AS S D ++K+WDVR + I GH V +KFSP + L + S D T+ LWD + L + +HT G++ E LLAS D V W Sbjct: 41 VNLWAVGKQNCIISLSGHTSPVDSVKFNSSE-ELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGE-FVASGSTDTNVKLWDVRR-KGCIYTYKGHSDQVNMIKFSPDGK-WLVTASEDTTIKLWD-LTMGKLFQEFKNHTGGVTGIEFHP-NEFLLASGSSDRTVQFW 212
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11 Identity = 51/179 (28.49%), Postives = 85/179 (47.49%), Query Frame = 2 Query: 2 VKLWTVDRPTSVRTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMIIPAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDFMVEDALVGRYDHHTE-FAVGVDMSVLVEGLLASTGWDELVYVW 535 +KLW V ++T K H+ V+ +NP S++ S S D +++IW+V+ + AH I A ++ + LI S S D +IWD + + + + V VKFSP+ + +L + + D T+ LWD+ L H E + + SV + S D +VY+W Sbjct: 105 LKLWDVRSGKCLKTLKGHSDFVFCCDFNP-PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFH-CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYIL-TATLDSTLKLWDYSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIW 280
BLAST of CX294547 vs. ExPASy Swiss-Prot
Match: WDR24_DICDI (WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum GN=wdr24 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.157e-11 Identity = 40/142 (28.17%), Postives = 66/142 (46.48%), Query Frame = 2 Query: 2 VKLWTVDRPTSV---RTFKEHAYCVYNATWNPRHSDVFCSASGDCTLRIWDVREMGSTMII---PAHEFEILACDWNKYDDCLIASASVDKSIKIWDVRNYRVPIAVLNGHGYAVRKVKFSPHRRNLLASCSYDMTVCLWDF 409 V +W R S R F +H+ V W+P D + S D TLR+WD+R+ + I P E I +N A+A + +I++WD+R + + + H V + + P +N++AS D + +WDF Sbjct: 95 VVIWNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSANASKITFSPKSE-SIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDF 235 The following BLAST results are available for this feature:
BLAST of CX294547 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 97
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Sequences
The
following sequences are available for this feature:
EST sequence >CX294547 ID=CX294547; Name=CX294547; organism=Citrus clementina; type=EST; length=599bpback to top |