CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: Y1744_MYCMM (Uncharacterized oxidoreductase MMAR_1744 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1744 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.875e-18
Identity = 62/191 (32.46%), Postives = 95/191 (49.74%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEAL------YDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN    +P +G+G           AV+AA++ G R ID A  YGNE  +G  +      + + R +L++T+K+  A H      EA   +L  L +DY+DLYL+HWP                    P+  K ++A          G  R+IGVSNF+ + + +++++  V PAVNQVE HP   Q +LR+
Sbjct:   14 LNDENTMPVLGMGVAGLSDDETERAVSAALEIGCRLIDTAAAYGNEAAVGRAIAA----SGIPRAELFVTTKVATADHGFTASREACKASLDRLGLDYVDLYLIHWPA-------------------PAAGKYVDAFGGLIQARGEGFTRSIGVSNFTEEHVSNVIDLTFVTPAVNQVELHPLLNQDELRK 181          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLE (Uncharacterized oxidoreductase ML1669 OS=Mycobacterium leprae GN=ML1669 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18
Identity = 61/190 (32.11%), Postives = 90/190 (47.37%), Query Frame = 2
Query:   38 IRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            I    LN    +P +GLG  +        AV AA++ G R ID A  YGNE  +   +      + + R  L++T+KL           +A + +L  L +DY+DLYL+HWP       VG              W  M      G AR+IGV NF+ + L  ++++  V PAVNQ+E HP   Q ++R+
Sbjct:   10 IPSITLNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAA----SGIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAP----PVG---------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: Y1669_MYCLB (Uncharacterized oxidoreductase MLBr01669 OS=Mycobacterium leprae (strain Br4923) GN=MLBr01669 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18
Identity = 61/190 (32.11%), Postives = 90/190 (47.37%), Query Frame = 2
Query:   38 IRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            I    LN    +P +GLG  +        AV AA++ G R ID A  YGNE  +   +      + + R  L++T+KL           +A + +L  L +DY+DLYL+HWP       VG              W  M      G AR+IGV NF+ + L  ++++  V PAVNQ+E HP   Q ++R+
Sbjct:   10 IPSITLNDENTMPLLGLGVAELSEDETERAVLAALEIGCRLIDTAAAYGNEAAVSRAIAA----SGIPRAQLFVTTKLATPDQGFTKSQDACNASLDRLGMDYVDLYLIHWPAP----PVG---------QYVDAWGGMIQSRGEGHARSIGVCNFTEEHLSAIIDLTFVTPAVNQIELHPLLNQDEMRK 182          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18
Identity = 59/178 (33.15%), Postives = 93/178 (52.25%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGD-LLEVARVPPAVNQVECHPSWQQQKL 601
            IP+ GLGT++    VV ++V  A++ GYR ID AQIY NE  +GL +     ++ V R +L+IT+K+W      + +  +L  +L+ L+ DY+DL L+HWP           P   D+  +    +A+      G  R IG+SNF+   +   +  V     A NQ+E  P  Q +K+
Sbjct:    3 IPAFGLGTFRLKDDVVISSVKTALELGYRAIDTAQIYDNEAAVGLAI----AESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP----------SPN--DEVSVEEFMQALLEAKKEGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKV 164          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKCL1_HUMAN (Aldo-keto reductase family 1 member C-like protein 1 OS=Homo sapiens GN=AKR1CL1 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 2
Query:   23 KMANEIRHFVLNTGAKIPSVGLGTWQSD---PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGS 394
            K ++ +R   LN G  +P +G GT+  D         A   AI  G+RHID A +Y NE+E+G  + +   D  VKRE+++ T KLW  +   E V  AL+R+L+ L  DY+DL+++H P  MK  S
Sbjct:    6 KQSHSVR---LNDGPFMPVLGFGTYAPDHTPKSQAAEATKVAIDVGFRHIDSAYLYQNEEEVGQAIWEKIADGTVKREEIFYTIKLWATFFRAELVHPALERSLKKLGPDYVDLFIIHVPFAMKGSS 129          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 3.536e-17
Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGD-LLEVARVPPAVNQVECHPSWQQQKL 601
            IP+ GLGT++    VV ++V  A++ GYR ID AQIY NE  +G  +     ++ V R +L+IT+K+W      + +  +L  +L+ L+ DY+DL L+HWP           P   D+  +    +A+      G  R IG+SNF+   +   +  V     A NQ+E  P  Q +K+
Sbjct:    3 IPAFGLGTFRLKDDVVISSVITALELGYRAIDTAQIYDNEAAVGQAI----AESGVPRHELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWP----------SPN--DEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKV 164          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17
Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDS---GKARAIGVSNFSTKKLGD-LLEVARVPPAVNQVECHPSWQQQKL 601
            IP+ GLGT++    VV  +V  A++ GYR +D AQIY NE  +G  +     ++ V R +L+IT+K+W      + +  +L  +L+ L+ DY+DL L+HWP                  D  S  + M+AL ++   G  R IG+SNF+   +   +  V     A NQ+E  P  Q +K+
Sbjct:    3 IPAFGLGTFRLKDDVVIASVKTALELGYRAVDTAQIYDNEAAVGQAI----AESGVPRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWP---------------SPGDAVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADNIATNQIELSPYLQNRKV 164          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.877e-17
Identity = 59/181 (32.60%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDS---GKARAIGVSNFSTKKLGD-LLEVARVPPAVNQVECHPSWQQQKL 601
            IP+ GLGT++    VV  +V  A++ GYR +D AQIY NE  +G  +     ++ V R +L+IT+K+W      + +  +L  +L+ L+ DY+DL L+HWP                  D  S  + M+AL ++   G  R IG+SNF+   +   +  V     A NQ+E  P  Q +K+
Sbjct:    3 IPAFGLGTFRLKDDVVIASVKTALELGYRAVDTAQIYDNEAAVGQAI----AESGVPRNELYITTKIWIENLSKDKLIPSLKESLKKLRTDYVDLTLIHWP---------------SPGDAVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRKV 164          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.292e-16
Identity = 57/179 (31.84%), Postives = 93/179 (51.96%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVG-FKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGD-LLEVARVPPAVNQVECHPSWQQQKL 601
            IP  GLGT++    +V ++V+ A+  GYR ID AQIY NE  +G  +    +++ + R++L+IT+K+W A    + +  +L  +++ L+ DY+DL L+HWP    + SV  F  E L    +             G  R IG+SNF+   +   +  V     A NQ+E  P  Q + +
Sbjct:    3 IPVFGLGTFRLQDQIVIDSVSQALTLGYRAIDTAQIYENEAPVGQAI----QESGINRDELFITTKIWIANLSKDKLIPSLRESIQKLKTDYVDLTLIHWPSPNDEVSVAEFMSELLKAKGL-------------GLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNV 164          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 5.284e-13
Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 2
Query:   50 VLNTGAKIPSVGLGTWQ--------SDPGVVGNAVAAAIKAGYRHIDCAQIYG---NEKEIGLVLKKFFE-DAVV---KREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVA 541
            + +TG +   +GLGTW         +D       + AA+  G   ID A  YG   +E+ +G  +K++ + D V+   K    W  ++L+   +    V E ++ +L+ LQ DY+DLY +HWP  +                I  T + M+ LYD+GK RAIGVSNFS +++     VA
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEE-VENSLKRLQTDYIDLYQVHWPDPLVP--------------IEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVA 169          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
Y1744_MYCMM1.875e-1832.46Uncharacterized oxidoreductase MMAR_1744 OS=Mycoba... [more]
Y1669_MYCLE7.124e-1832.11Uncharacterized oxidoreductase ML1669 OS=Mycobacte... [more]
Y1669_MYCLB7.124e-1832.11Uncharacterized oxidoreductase MLBr01669 OS=Mycoba... [more]
DKGB_ECO577.124e-1833.152,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
AKCL1_HUMAN1.215e-1738.58Aldo-keto reductase family 1 member C-like protein... [more]
DKGB_ECOLI3.536e-1732.582,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_SALTY7.877e-1732.602,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_SALTI7.877e-1732.602,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_YERPE2.292e-1631.842,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]
GS69_BACSU5.284e-1331.28General stress protein 69 OS=Bacillus subtilis GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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