CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.689e-41
Identity = 89/190 (46.84%), Postives = 118/190 (62.11%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENL-----DKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            L+T AK+P VGLGTW+S  G V  AV  AI AGYRHIDCA +Y NE E+G  +++  ++  VKREDL+I SKLW  + E   V +A ++TL+DL++ YLD+YL+HWP   K G   F  ++       K      W+AME L D G  +A+GVSNFS  ++  LL     +  P  NQVECHP   Q+KL
Sbjct:    7 LSTKAKMPIVGLGTWKSPLGKVKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKCL2_PIG (1,5-anhydro-D-fructose reductase OS=Sus scrofa GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.511e-41
Identity = 91/192 (47.40%), Postives = 116/192 (60.42%), Query Frame = 2
Query:   68 KIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP------------DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            KIP +GLGTWQ+ PG V  AV  AI  GYRH DCA +Y NE E+G+ ++   ++ VV+REDL+I SKLW   H+   V  A  R+L+ L++ YLDLYL+HWP       +GFKP  +D P            D   TW+AME L   G  RAIGVSNF+ ++L  LL     RV P  NQ+ECHP   Q+KL
Sbjct:    3 KIPVLGLGTWQAAPGEVTEAVKVAIDTGYRHFDCAYLYHNENEVGVGIQAKIDEGVVRREDLFIVSKLWCTCHKKSLVKSACTRSLKALKLQYLDLYLIHWP-------MGFKPGEVDLPVDRSGMIVASNTDFLDTWEAMEDLVIEGLVRAIGVSNFNHEQLERLLNKPNLRVKPVTNQIECHPYLTQKKL 187          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: ALD2_CRIGR (Aldose reductase-related protein 2 OS=Cricetulus griseus GN=AKR1B8 PE=1 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 7.822e-41
Identity = 89/192 (46.35%), Postives = 118/192 (61.46%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKLRE 607
            L+T AK+P VGLGTWQS PG V  AV  AI AGYRHIDCA  Y NE E+G  +++  ++  V+REDL+I SKLW    E + + EA  +TL DL++DYLDLYL+HWP  ++ G   F  ++       K      W+ ME L D G  +A+GVSNF+  ++  +L     +  P  NQVECHP   Q+KL E
Sbjct:    7 LSTKAKMPIVGLGTWQSPPGQVKEAVKVAIDAGYRHIDCAYAYYNEHEVGEAIQEKIKEKAVRREDLFIVSKLWPTCFERKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGNVLTSKITFLDAWEVMEELVDEGLVKALGVSNFNHFQIERILNKPGLKHKPVTNQVECHPYLTQEKLIE 198          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: XYL2_CANTR (NADPH-dependent D-xylose reductase II,III OS=Candida tropicalis GN=xyrB PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.743e-40
Identity = 86/196 (43.88%), Postives = 127/196 (64.80%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK------KGSVGF---KPENLDKPDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN+G ++P VG G W+ +     + +  AIK GYR  D A+ YGNEKE+G  + +  ++ +VKRE+L+ITSKLWN +H+P++V  AL++TL DL +DY+DL+L+H+P+  K      K   GF     +N    D+P   TWKA+E L ++GK ++IG+SNF+   + DL+  A + PAV Q+E HP  QQ KL E
Sbjct:   12 LNSGYEMPLVGFGCWKVNNETAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIE 207          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: XYL1_CANTR (NAD(P)H-dependent D-xylose reductase I,II OS=Candida tropicalis GN=xyrA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.743e-40
Identity = 86/196 (43.88%), Postives = 126/196 (64.29%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK------KGSVGF---KPENLDKPDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN+G ++P VG G W+       + +  AIK GYR  D A+ YGNEKE+G  + +  ++ +VKRE+L+ITSKLWN +H+P++V  AL++TL DL +DY+DL+L+H+P+  K      K   GF     +N    D+P   TWKA+E L ++GK ++IG+SNF+   + DL+  A + PAV Q+E HP  QQ KL E
Sbjct:   12 LNSGYEMPLVGFGCWKVTNATAADQIYNAIKTGYRLFDGAEDYGNEKEVGEGINRAIKEGLVKREELFITSKLWNNFHDPKNVETALNKTLSDLNLDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFHYEDVPLLDTWKALEKLVEAGKIKSIGISNFTGALIYDLIRGATIKPAVLQIEHHPYLQQPKLIE 207          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: ALD2_MOUSE (Aldose reductase-related protein 2 OS=Mus musculus GN=Akr1b8 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 1.743e-40
Identity = 88/190 (46.32%), Postives = 117/190 (61.58%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            L+T AK+P VGLGTW+S P  V  AV AAI AGYRHIDCA  Y NE E+G  +++  ++  V+REDL+I SKLW    E + + EA  +TL DL++DYLDLYL+HWP  ++ G   F  ++       K      W+ ME L D G  +A+GVSNF+  ++  LL     +  P  NQVECHP   Q+KL
Sbjct:    7 LSTKAKMPIVGLGTWKSPPNQVKEAVKAAIDAGYRHIDCAYAYCNENEVGEAIQEKIKEKAVQREDLFIVSKLWPTCFEKKLLKEAFQKTLTDLKLDYLDLYLIHWPQGLQPGKELFPKDDQGRILTSKTTFLEAWEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLTQEKL 196          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: ALDR_HORVU (Aldose reductase OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.276e-40
Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 2
Query:   44 HFVLNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPE--NLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            HFVL +G  +P+VGLGTW++      +   A  +AGYRH+D A  YG EKE+G  LK   E A + R+DL++TSK+W     PE V  AL+ TL+DLQ+DY+DLY +HWP ++K G+    PE   + + D+   WK ME L   G  + IGV N++  KL  LL  A++PPAV Q+E HP W+  K+ E
Sbjct:   15 HFVLKSGHAMPAVGLGTWRAGSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAME-AGIDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGA-HMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFE 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKCL2_RAT (1,5-anhydro-D-fructose reductase OS=Rattus norvegicus GN=Akr1e2 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.973e-40
Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 2
Query:   68 KIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP------DIPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            +IP+VGLGTW++ PG V +AV  AI  GYRH DCA +Y NE E+G+ +K+  ++ VVKR++L+I SKLW  YH+   V  A   TL  L +DYLDLYL+HWP       +GFKP + D P       IPS      TW+AME L   G  + IGVSNF+ ++L  LL     R+ P  NQ+ECHP   Q+ L
Sbjct:    3 QIPTVGLGTWKASPGEVTDAVKVAINLGYRHFDCAYLYHNESEVGMGIKEKIKEGVVKRDELFIVSKLWCTYHKQSLVKTACINTLEALNLDYLDLYLIHWP-------MGFKPGDKDIPLDRSGKVIPSHTSFLDTWEAMEDLVIEGLVKNIGVSNFNHEQLDRLLNKPGLRIKPITNQIECHPYLNQKSL 187          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.882e-40
Identity = 84/198 (42.42%), Postives = 123/198 (62.12%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK------KGSVGF-------KPENLDKPDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            LN G K+P VGLG W+    V  + +  AIK GYR  D AQ Y NEKE+G  + +  ++ +VKREDL + SKLWN++H P++VP AL+RTL DLQ+DY+D++ +H+P+  K      K   GF          ++++  +P   TW+A+E L D GK +++G+SNFS   + DLL  AR+ P   Q+E HP   Q++L
Sbjct:   10 LNNGEKMPLVGLGCWKMPNDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKREDLVVVSKLWNSFHHPDNVPRALERTLSDLQLDYVDIFYIHFPLAFKPVPFDEKYPPGFYTGKEDEAKGHIEEEQVPLLDTWRALEKLVDQGKIKSLGISNFSGALIQDLLRGARIKPVALQIEHHPYLTQERL 207          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKCL2_MOUSE (1,5-anhydro-D-fructose reductase OS=Mus musculus GN=Akr1e2 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.130e-39
Identity = 90/191 (47.12%), Postives = 116/191 (60.73%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP------DIPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            IP+VGLGTW++ PG V +AV  AI  GYRH DCA +Y NE E+G+ + +  ++ VVKREDL++ SKLW   H+   V  A   TL  L +DYLDLYL+HWP       +GFKP   D P       IPS      TW+AME L   G  + +GVSNF+ ++L  LL+    RV P  NQ+ECHP   Q+KL
Sbjct:    4 IPTVGLGTWKASPGEVTDAVKLAINLGYRHFDCAYLYHNESEVGMGISEKIKEGVVKREDLFVVSKLWCTCHKKSLVKTACTNTLEALNLDYLDLYLIHWP-------MGFKPGEKDIPLDRNGKVIPSHTSFLDTWEAMEDLVFEGLVKNLGVSNFNHEQLERLLDKPGLRVRPITNQIECHPYLNQKKL 187          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AK1BA_HUMAN2.689e-4146.84Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
AKCL2_PIG3.511e-4147.401,5-anhydro-D-fructose reductase OS=Sus scrofa GN=... [more]
ALD2_CRIGR7.822e-4146.35Aldose reductase-related protein 2 OS=Cricetulus g... [more]
XYL2_CANTR1.743e-4043.88NADPH-dependent D-xylose reductase II,III OS=Candi... [more]
XYL1_CANTR1.743e-4043.88NAD(P)H-dependent D-xylose reductase I,II OS=Candi... [more]
ALD2_MOUSE1.743e-4046.32Aldose reductase-related protein 2 OS=Mus musculus... [more]
ALDR_HORVU2.276e-4045.26Aldose reductase OS=Hordeum vulgare PE=1 SV=1[more]
AKCL2_RAT2.973e-4046.881,5-anhydro-D-fructose reductase OS=Rattus norvegi... [more]
XYL1_KLULA3.882e-4042.42NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
AKCL2_MOUSE1.130e-3947.121,5-anhydro-D-fructose reductase OS=Mus musculus G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
back to top