CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: ALRB_DICDI (Aldose reductase B OS=Dictyostelium discoideum GN=alrB PE=3 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 4.292e-39
Identity = 89/205 (43.41%), Postives = 123/205 (60.00%), Query Frame = 2
Query:   23 KMANEIRHFVLNTGAKIPSVGLGTWQ-SDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGS-VGFKPENLDKPD---------IPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLR 604
            K+ ++I H        IP +GLGT+  +  G VG+AV  A+K+GYRHID A IY NEKEIG  LK+ F +  +KRED++  SKLWN+ H    V +  ++TL DL ++YLDLYL+HWP+  +     G   + L   D         I  TW+ ME L + G  ++IGVSNF+ + L DLL  A++ PA+NQVE HP   Q  L+
Sbjct:    9 KLNDDIHH--------IPMIGLGTYNGAKVGEVGDAVKVALKSGYRHIDGAAIYMNEKEIGHALKEVFAEGEIKREDIFYVSKLWNSCHHASLVRKHCEKTLEDLGLEYLDLYLIHWPIAFENADPSGTTTQPLRDSDGEPVLAAVSIRETWQEMEKLVEYGLVKSIGVSNFNVQNLVDLLTYAKIKPAINQVEVHPYLSQPNLK 205          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: CRO_RANTE (Rho crystallin OS=Rana temporaria PE=2 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 1.249e-38
Identity = 88/194 (45.36%), Postives = 116/194 (59.79%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSD---PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP------DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +GLGT+ S      +   AV  AI  GYRHIDCA I GNE  IG  ++    D  VKRED++ T KLW  Y  PE V + L+R+LRD+ +DYLDL+LMHWPV +K       P + DKP      D+ +TW+A+EA  D+G  R++GVSNF+ ++L  +L     +  P  NQVECH    Q KL
Sbjct:   11 LNDGNMMPILGLGTYASPHVPKSLAEEAVKIAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPEMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGAS-DPSDKDKPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQVECHVYLNQNKL 203          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: CRO_RANCA (Rho crystallin OS=Rana catesbeiana PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.746e-38
Identity = 86/194 (44.33%), Postives = 116/194 (59.79%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDP---GVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP------DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +GLGT+ +      +   AV  AI  GYRHIDCA I GNE  IG  ++    D  VKRED++ T KLW  Y  P+ V + L+R+LRD+ +DYLDL+LMHWPV +K       P + DKP      D+ +TW+A+EA  D+G  R++GVSNF+ ++L  +L     +  P  NQVECH    Q KL
Sbjct:   11 LNDGNMMPILGLGTYAAPDVPKSLAEEAVKTAIDVGYRHIDCAFITGNEMHIGNGIRSKISDGTVKREDIFYTGKLWCTYFSPDMVRKGLERSLRDVGMDYLDLFLMHWPVSLKPSGAS-DPSDKDKPFIYDNVDLCATWEALEARKDAGLVRSLGVSNFNRRQLERILNKPGLKYKPVCNQVECHVYLNQNKL 203          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 8.095e-38
Identity = 87/193 (45.08%), Postives = 123/193 (63.73%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTW---QSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKG-SVGFKPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+   +        AV  AI+AG+ HID A +Y NE+++GL ++    D  VKRED++ TSKLW+  H PE V  AL+R+L++LQ+DY+DLYL+H+PV +K G  V  K EN     D  D+ +TW+AME   D+G A++IGVSNF+ + L  +L     +  P  NQVECHP + Q+KL
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.057e-37
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+         A+ A   AI+AG+RHID A +Y NE+ +GL ++    D  VKRED++ TSKLW   H PE V  AL+R+L++LQ+DY+DLYL+H+PV +K G     K EN     D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q+KL
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKNKAIEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPGEELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.381e-37
Identity = 87/193 (45.08%), Postives = 124/193 (64.25%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKG-SVGFKPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+         A+ A   AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW   H PE V  AL+R+L++LQ+DY+DLYL+H+PV +K G  V  K EN     D  D+ +TW+A+E   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP + Q+KL
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKC1H_RAT (Aldo-keto reductase family 1 member C18 OS=Rattus norvegicus GN=Akr1c18 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.803e-37
Identity = 84/202 (41.58%), Postives = 122/202 (60.40%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVP--PAVNQVECHPSWQQQKL 601
            M ++I+   LN G  IP +G GT+ ++  +   ++ +   AI  G+RHIDC+ +Y NE+EIG  +    ED  VKRED++ TSKLW+  H PE V  +L+ +LR L +DY+DLYL+H+PV +K G      +      LD  D+  TW+AME   D+G A++IGVSNF+ ++L  +L    +   P  NQVECH    Q KL
Sbjct:    1 MNSKIQKMELNDGHSIPVLGFGTYATEENLRKKSMESTKIAIDVGFRHIDCSHLYQNEEEIGQAIVSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGDELLPQDEHGNLILDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILNKPGLKHRPVCNQVECHLYLNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.803e-37
Identity = 87/193 (45.08%), Postives = 123/193 (63.73%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKG-SVGFKPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN    +P +G GT+         A+ A   AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW   H PE V  AL+R+L++LQ+DY+DLYL+H+PV +K G  V  K EN     D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP + Q+KL
Sbjct:   10 LNDSHFMPVLGFGTYAPPEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLVHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.803e-37
Identity = 87/193 (45.08%), Postives = 121/193 (62.69%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+         A+ A   AI+AG+RHID A +Y NE+ +GL ++    D  VKRED++ TSKLW   H PE V  AL+R+L++LQ+DY+DLYL+H+PV +K G     K EN     D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q+KL
Sbjct:   10 LNDGHFMPVLGFGTYAPAEVPKNKALEATKLAIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVKREDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPGEELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 82/196 (41.84%), Postives = 123/196 (62.76%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKM------KKGSVGFKPENLDK---PDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN+G +IP VG G W+    V  + +  AIK+GYR  D A+ Y NE+E+G  +K+  ++ +VKRE+L+ITSKLWN++H+ ++V  AL +TL DL +DY+DL+ +H+P+        KK   GF   + DK    ++P   TW+A+E L D G A++IG+SNFS + + DL+    + P   Q+E HP   Q KL E
Sbjct:   12 LNSGYEIPLVGFGCWKLTNDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKREELFITSKLWNSFHDKKNVEVALMKTLSDLNLDYVDLFYIHFPIAQKPVPIEKKYPPGFYCGDGDKWSIEEVPLLDTWRALEKLVDQGLAKSIGISNFSAQLIYDLIRGCTIKPVALQIEHHPYLTQPKLVE 207          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
ALRB_DICDI4.292e-3943.41Aldose reductase B OS=Dictyostelium discoideum GN=... [more]
CRO_RANTE1.249e-3845.36Rho crystallin OS=Rana temporaria PE=2 SV=3[more]
CRO_RANCA4.746e-3844.33Rho crystallin OS=Rana catesbeiana PE=1 SV=2[more]
AK1C2_HUMAN8.095e-3845.08Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
AK1C1_MACFU1.057e-3745.08Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_HUMAN1.381e-3745.08Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
AKC1H_RAT1.803e-3741.58Aldo-keto reductase family 1 member C18 OS=Rattus ... [more]
AK1C1_PONAB1.803e-3745.08Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_MACFA1.803e-3745.08Aldo-keto reductase family 1 member C1 homolog OS=... [more]
XYL1_CANPA3.076e-3741.84NADH-dependent D-xylose reductase OS=Candida parap... [more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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