CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: GCY_YEAST (Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 90/199 (45.23%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLW-NAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKG--------SVGFKPENLDKPDIPS-----TWKAMEALYDSGKARAIGVSNFSTKKLGDLL--EVARVPPAVNQVECHPSWQQQKL 601
            LNTGA+IP +GLGTWQS       AV  A+K GYRHID A IY NE ++G  +K    D+ V RE++++T+KLW   +HEPE    ALD++L+ L +DY+DLYLMHWP ++           SV  K +     DI +     TW+ M+ L  +GK +A+GVSNFS   L DLL  +  ++ PA NQVE HP   Q +L
Sbjct:   14 LNTGAQIPQIGLGTWQSKENDAYKAVLTALKDGYRHIDTAAIYRNEDQVGQAIK----DSGVPREEIFVTTKLWCTQHHEPE---VALDQSLKRLGLDYVDLYLMHWPARLDPAYIKNEDILSVPTKKDGSRAVDITNWNFIKTWELMQELPKTGKTKAVGVSNFSINNLKDLLASQGNKLTPAANQVEIHPLLPQDEL 205          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DHB5_MOUSE (Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus GN=Akr1c6 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.017e-37
Identity = 87/193 (45.08%), Postives = 118/193 (61.14%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            L+ G  IP +G GT+         A  A   AI AG+RHID A +Y NEKE+GL ++    D  VKRED++ TSK+W  +H PE V   L+++L+ LQ+DY+DLYL+H+P+ MK G     K EN     D  DI  TW+AME   D+G A++IGVSNF+ ++L  +L+    +  P  NQVECHP   Q KL
Sbjct:   10 LSDGHFIPILGFGTYAPQEVPKSKATEATKIAIDAGFRHIDSASMYQNEKEVGLAIRSKIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQSLKQLQLDYVDLYLIHFPMAMKPGENYLPKDENGKLIYDAVDICDTWEAMEKCKDAGLAKSIGVSNFNRRQLEKILKKPGLKYKPVCNQVECHPYLNQGKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: PE2R_RABIT (Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuniculus GN=AKR1C5 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.950e-37
Identity = 87/205 (42.44%), Postives = 123/205 (60.00%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKLRE 607
            M  + +   L+ G  IP +G GT+  +      A+ A   AI AG+RHID A  Y NEKE+GL ++    D  VKRED++ TSKLW  +H PE V  +L+ +L++LQ+DY+DLY++H+P  +K G V   P +       D  DI +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL E
Sbjct:    1 MDPKFQRVALSDGHFIPVLGFGTYAPEEVPKSKAMEATKIAIDAGFRHIDSAYFYKNEKEVGLAIRSKIADGTVKREDIFYTSKLWCTFHRPELVRPSLEDSLKNLQLDYVDLYIIHFPTALKPG-VEIIPTDEHGKAIFDTVDICATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQGKLLE 204          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1CO_HORSE (Aldo-keto reductase family 1 member C23-like protein OS=Equus caballus GN=PGFS PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.169e-36
Identity = 85/194 (43.81%), Postives = 118/194 (60.82%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  IP +G GT+  +       V     AI AG+RHID A  Y NEKE+G  ++   ED  VKRED++ TSKLW  +  PE V  AL+++L +LQ+DY+DLY++H+P+ +K G   F PE+       D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL
Sbjct:   10 LNDGHVIPVLGFGTYAPEEVPKSRTVEVTKLAIDAGFRHIDSAYSYNNEKEVGQAIRSKIEDGTVKREDIFYTSKLWLTFLRPELVRPALEKSLTNLQLDYVDLYIIHFPIALKPGEELF-PEDEHGKLIFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.604e-36
Identity = 82/187 (43.85%), Postives = 117/187 (62.57%), Query Frame = 2
Query:   68 KIPSVGLG-----TWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF--KPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            ++P VG+G     T + D      A+  A+K GYRH D A  YG+E+ +G  LK+     +V R+DL++TSKLW   + P  V  AL ++L+ LQ++YLDLYL+HWP+  + G   F  + E+L   D+   W++ME     G  +AIGVSNFS KKL +LL VA + P V+QVE + +WQQ+KLRE
Sbjct:   20 RMPVVGMGSAPDFTCKKD---TKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLVSRQDLFVTSKLWVTENHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQPGKFSFPIEVEDLLPFDVKGVWESMEECQKLGLTKAIGVSNFSVKKLQNLLSVATIRPVVDQVEMNLAWQQKKLRE 203          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1D1_RAT (3-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus norvegicus GN=Akr1d1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.401e-36
Identity = 83/198 (41.92%), Postives = 120/198 (60.61%), Query Frame = 2
Query:   44 HFVLNTGAKIPSVGLGTWQSD---PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKLRE 607
            H  LN G  IP +GLGT+      PG    AV  AI  GYRHID A +Y NE E+G  +++   +  VKRE+++   KLW+  H+PE V  AL+RTL+ L++DY+DLY++  P+  K G   + K EN      K ++ +TW+A+EA  D+G  +++GVSNF+ ++L  +L     +  P  NQVECHP + Q KL E
Sbjct:    9 HIPLNDGNSIPIIGLGTYSDPRPVPGKTFIAVKTAIDEGYRHIDGAYVYRNEHEVGEAIREKVAEGKVKREEIFYCGKLWSTDHDPEMVRPALERTLQTLKLDYIDLYIIEMPMAFKPGEEFYPKDENGRVIYHKSNLCATWEALEACKDAGLVKSLGVSNFNRRQLEVILNKPGLKYKPVTNQVECHPYFTQTKLLE 206          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C4_HUMAN (Aldo-keto reductase family 1 member C4 OS=Homo sapiens GN=AKR1C4 PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.401e-36
Identity = 83/194 (42.78%), Postives = 120/194 (61.86%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA----AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+ + P V  N        AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW  + +P+ V  AL+ +L+ LQ+DY+DLYL+H+P+ +K G     K EN     D  D+ +TW+ ME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL
Sbjct:   10 LNDGHFMPVLGFGTY-APPEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFQPQMVQPALESSLKKLQLDYVDLYLLHFPMALKPGETPLPKDENGKVIFDTVDLSATWEVMEKCKDAGLAKSIGVSNFNCRQLEMILNKPGLKYKPVCNQVECHPYLNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.442e-36
Identity = 82/202 (40.59%), Postives = 121/202 (59.90%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            M ++I+   LN G  IP +G GT+ ++  +   ++ +   AI  G+ HIDC+ +Y NE+EIG  +    ED  VKRED++ TSKLW+  H PE V  +L+ +LR L +DY+DLYL+H+PV +K G+     +       D  D+  TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECH    Q KL
Sbjct:    1 MNSKIQKIELNDGHSIPVLGFGTYATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILSKIEDGTVKREDIFYTSKLWSTSHRPELVRPSLENSLRKLNLDYVDLYLIHFPVSLKPGNELLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHLYLNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.577e-36
Identity = 81/193 (41.97%), Postives = 117/193 (60.62%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKP-----DIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  IP +G GT+         A+     AI+AG+RHID A +Y NE+++G  ++    D  VKRED++ TSKLW+    PE V  AL+++L +LQ+DY+DLY++H+PV +K G   F  +   KP     D+  TW+A+E   D+G  ++IGVSNF+ K+L  +L     +  P  NQVECHP + Q KL
Sbjct:   10 LNDGHFIPVLGFGTFAPREVPKSEALEVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFPVALKPGETLFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYFNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 7.577e-36
Identity = 82/193 (42.49%), Postives = 118/193 (61.14%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  I ++G GT+  +      AV A   AI AG+RHIDCA +Y NEKE+GL ++   +D  VKRED++ TSKLW      + V  AL+++L++LQ+DY+DLY++H+PV +K G      +       D  D+ +TW+AME   D+G  ++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL
Sbjct:   10 LNDGHFIHALGFGTYAPNEVPKSKAVEATKSAIDAGFRHIDCAHLYDNEKEVGLAIRSKIQDGTVKREDIFCTSKLWATSLRLQLVRPALEKSLKNLQLDYVDLYIIHFPVAVKPGEEHLPQDEQGRMIFDTVDLCATWEAMEKCKDAGLTKSIGVSNFNRRQLEMILNKPGLKHKPVCNQVECHPYLNQSKL 202          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
GCY_YEAST3.076e-3745.23Protein GCY OS=Saccharomyces cerevisiae GN=GCY1 PE... [more]
DHB5_MOUSE4.017e-3745.08Estradiol 17 beta-dehydrogenase 5 OS=Mus musculus ... [more]
PE2R_RABIT8.950e-3742.44Prostaglandin-E(2) 9-reductase OS=Oryctolagus cuni... [more]
AK1CO_HORSE1.169e-3643.81Aldo-keto reductase family 1 member C23-like prote... [more]
6DCS_SOYBN2.604e-3643.85NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
AK1D1_RAT3.401e-3641.923-oxo-5-beta-steroid 4-dehydrogenase OS=Rattus nor... [more]
AK1C4_HUMAN3.401e-3642.78Aldo-keto reductase family 1 member C4 OS=Homo sap... [more]
AKC1H_MOUSE4.442e-3640.59Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
DDBX_BOVIN7.577e-3641.97Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]
AK1CN_HORSE7.577e-3642.49Aldo-keto reductase family 1 member C23 OS=Equus c... [more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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