CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.895e-36
Identity = 82/200 (41.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK------KGSVGF-------KPENLDKPDIP--STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN G K+P VGLG W+ D  V  N +  AIK GYR  D A  YGNEKE+G  ++K   + +V R+D+++ SKLWN +H P+ V  AL +TL D+ +DYLDLY +H+P+  K      K   GF       K  ++ +  +P   T++A+E   D G  ++IGVSNF    + DLL   R+ P   Q+E HP   Q+ L E
Sbjct:    7 LNNGLKMPLVGLGCWKIDKKVCANQIYEAIKLGYRLFDGACDYGNEKEVGEGIRKAISEGLVSRKDIFVVSKLWNNFHHPDHVKLALKKTLSDMGLDYLDLYYIHFPIAFKYVPFEEKYPPGFYTGADDEKKGHITEAHVPIIDTYRALEECVDEGLIKSIGVSNFQGSLIQDLLRGCRIKPVALQIEHHPYLTQEHLVE 206          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.895e-36
Identity = 85/203 (41.87%), Postives = 123/203 (60.59%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA----AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLE--VARVPPAVNQVECHPSWQQQKL 601
            M  + +   LN G  +P +G GT+ + P V  N V      AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW  +  P+ V  AL+ +L+ LQ+DY+DLYL+H+P+ +K G     K EN     D  D+ + W+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL
Sbjct:    1 MDPKYQRVALNDGHFMPVLGFGTY-APPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGETPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKYKPVCNQVECHPYLNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.688e-35
Identity = 86/198 (43.43%), Postives = 119/198 (60.10%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSV-------------GFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVA--RVPPAVNQVECHPSWQQQKL 601
            LNTGA IP +G GTW+S      ++V AA+KAGYRHID A IY NE+E+G  +K    D+ V RE+++IT+KLW    E  D   AL+++L+ L +DY+DLYLMHWPV +K   V             G    +  + +   TW+ M+ L  +GK +A+GVSNFS   + +LLE    +V PA NQ+E HP   Q +L
Sbjct:   14 LNTGASIPVLGFGTWRSVDNNGYHSVIAALKAGYRHIDAAAIYLNEEEVGRAIK----DSGVPREEIFITTKLWGT--EQRDPEAALNKSLKRLGLDYVDLYLMHWPVPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKTKAVGVSNFSINNIKELLESPNNKVVPATNQIEIHPLLPQDEL 205          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C3_PONAB (Aldo-keto reductase family 1 member C3 homolog OS=Pongo abelii GN=AKR1C3 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.204e-35
Identity = 81/193 (41.97%), Postives = 119/193 (61.66%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKG-SVGFKPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+         A+     AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW+ +H PE V  AL+ +L+  Q+DY+DLYL+H P+ +K G  +    EN     D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP + + KL
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEECKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.204e-35
Identity = 81/193 (41.97%), Postives = 119/193 (61.66%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKG-SVGFKPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  +P +G GT+         A+     AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW+ +H PE V  AL+ +L+  Q+DY+DLYL+H P+ +K G  +    EN     D  D+ +TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP + + KL
Sbjct:   10 LNDGHFMPVLGFGTYAPPEVPRSKALEVTKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNRSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.879e-35
Identity = 84/203 (41.38%), Postives = 123/203 (60.59%), Query Frame = 2
Query:   26 MANEIRHFVLNTGAKIPSVGLGTWQSDPGVVGNAVAA----AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLE--VARVPPAVNQVECHPSWQQQKL 601
            M  + +   LN G  +P +G G++ + P V  N V      AI+AG+RHID A +Y NE+++GL ++    D  VKRED++ TSKLW  +  P+ V  AL+ +L+ LQ+DY+DLYL+H+P+ +K G     K EN     D  D+ + W+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECHP   Q KL
Sbjct:    1 MDPKYQRVALNDGHFMPVLGFGSY-APPEVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCTFFRPQLVQPALESSLKKLQLDYVDLYLIHFPMALKPGETPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNNPGLKYKPVCNQVECHPYLNQSKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.377e-35
Identity = 84/195 (43.08%), Postives = 109/195 (55.90%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK--KGSVGFKP----------ENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            LN+G  +P VG G W+ D  V  + V  AIKAGYR  D A  YGNEKE G  + +  +D +VKREDL+I SKLW  +H+ + V     R L D QIDY DL+L+H+P  ++    SV + P                 +  TW AME L D G AR+IGVSN+  + + D L  AR+ PA  Q+E HP  QQ  L
Sbjct:    8 LNSGYDMPQVGFGLWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSVYDALIYARIKPATLQIEHHPYLQQPDL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 8.377e-35
Identity = 81/196 (41.33%), Postives = 120/196 (61.22%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKLRE 607
            LN G  IP +G GT+  +      A+ A   AI+ G+RH+D A +Y NE+++G  ++    D  VKRED++ TSKLW    +PE V  AL+++L++LQ+DY+DLY++H PV +K G+  F P++       D  D+  TW+A+E   D+G  ++IGVSNF+ K+L  +L     +  P  NQVECHP   Q KL E
Sbjct:   10 LNDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGN-KFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLE 204          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: YTBE_BACSU (Uncharacterized oxidoreductase ytbE OS=Bacillus subtilis GN=ytbE PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.437e-34
Identity = 80/184 (43.48%), Postives = 109/184 (59.24%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGV-VGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKL 601
            L+ G ++P  GLG +Q + G  + NAV  AI  GYR ID A IYGNE  +G  +++  E+A + REDL+ITSK+WNA    E+   A + +L  L +DYLDLYL+HWPV+ K                   W+A+E LY  G+ +AIGVSNF    L DL+  A + P +NQVE HP   Q++L
Sbjct:   11 LHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGK---------------YKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKEL 179          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.437e-34
Identity = 80/195 (41.03%), Postives = 119/195 (61.03%), Query Frame = 2
Query:   56 NTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKLRE 607
            N G  IP +G GT+  +      A+ A   AI+ G+RH+D A +Y NE+++G  ++    D  VKRED++ TSKLW    +PE V  AL+++L++LQ+DY+DLY++H PV +K G+  F P++       D  D+  TW+A+E   D+G  ++IGVSNF+ K+L  +L     +  P  NQVECHP   Q KL E
Sbjct:   11 NDGHFIPVLGFGTYAPEEVPKSEALEATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKREDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGN-KFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLE 204          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
GRE3_YEAST9.895e-3641.00NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
AK1C4_MACFA9.895e-3641.87Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
YPR1_YEAST1.688e-3543.43Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
AK1C3_PONAB2.204e-3541.97Aldo-keto reductase family 1 member C3 homolog OS=... [more]
AK1C3_HUMAN2.204e-3541.97Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
AK1C4_MACFU2.879e-3541.38Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
XYL1_TRIRE8.377e-3543.08NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
PGFS1_BOVIN8.377e-3541.33Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
YTBE_BACSU2.437e-3443.48Uncharacterized oxidoreductase ytbE OS=Bacillus su... [more]
PGFS2_BOVIN2.437e-3441.03Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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