CX294559

Overview
NameCX294559
Unique NameCX294559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length608
Libraries
Library NameType
FlavRip1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5597 contig Ccv1_Contig5597:178..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1D1_MOUSE (3-oxo-5-beta-steroid 4-dehydrogenase OS=Mus musculus GN=Akr1d1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.437e-34
Identity = 80/193 (41.45%), Postives = 117/193 (60.62%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSD---PGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            L+ G  IP +GLGT+      PG    AV  AI  GYRHID A +Y NE E+G  +++   +  VKRE+++   KLWN  H P  V  AL+RTL+ L++DY+DLY++  P+  K G   + + EN     DK ++ +TW+A+EA  D+G  +++GVSNF+ ++L  +L     +  P  NQVECHP + Q KL
Sbjct:   12 LSDGNNIPLIGLGTYSDPRPVPGKTYVAVKTAIDEGYRHIDGAYVYHNEHEVGEAIREKIAEGKVKREEIFYCGKLWNTEHVPSMVLPALERTLKALKLDYIDLYIIELPMAFKPGKEIYPRDENGRIIYDKTNLCATWEALEACKDAGLVKSLGVSNFNRRQLELILNKPGLKYKPVTNQVECHPYFTQTKL 204          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: Y2408_MYCS2 (Uncharacterized oxidoreductase MSMEG_2408 OS=Mycobacterium smegmatis GN=MSMEG_2408 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.183e-34
Identity = 83/185 (44.86%), Postives = 109/185 (58.92%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN G  IP VGLG WQ+       AVAAA++AGYRHID A  Y NE E G    +   ++ V RED+++ +KLWN+    +    A D +++ L +DYLDLYL+HWPV          PEN    D   T+KA   L D G+ R+IGVSNF  + L  L+E   + PAVNQ+E HP   QQ+LR+
Sbjct:    7 LNDGNSIPQVGLGVWQTPAEDTERAVAAALQAGYRHIDTAAAYRNETETG----RAIANSGVPREDIFLVTKLWNSDQGYDATLAAFDASVQRLGVDYLDLYLIHWPV----------PENNKFVD---TFKAFAHLRDQGRIRSIGVSNFEPEHLTTLIEETGIVPAVNQIELHPLLPQQELRD 174          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.430e-34
Identity = 80/195 (41.03%), Postives = 112/195 (57.44%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMK------KGSVGFKPE----NLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            LN+G  +P VG G W+ +     + +  AIK GYR  D A  YGNE E G  + +  +D +VKRE+L+I SKLWN++H+ + V     + L D  IDY DLY++H+P+ +K      +   G+K E          I  TW AME+L D   AR+IG+SNFS + + DLL  AR+ PA  Q+E HP   Q +L E
Sbjct:    8 LNSGYDMPLVGFGLWKVNNDTCADQIYHAIKEGYRLFDGACDYGNEVEAGQGIARAIKDGLVKREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLKYVDPAVRYPPGWKSEKDELEFGNATIQETWTAMESLVDKKLARSIGISNFSAQLVMDLLRYARIRPATLQIEHHPYLTQTRLVE 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKCL2_MACFA (1,5-anhydro-D-fructose reductase OS=Macaca fascicularis GN=AKR1E2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 9.262e-34
Identity = 86/210 (40.95%), Postives = 115/210 (54.76%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----------------------LDKPD--IP------STWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            IP+VGL  W++ PG V  AV  AI AGYRH +CA  Y NEKE+G  ++   ++  V+REDL+I SKLW   H+   V  A  R+L+ L+++YLDLYL+HWP       +GFKP +                       LD+ D  IP       TW+AME L  +G  + IGVSNF+ ++L  LL     R  P  NQ+ECHP   Q+ L
Sbjct:    4 IPAVGLSCWKASPGKVTEAVKVAIDAGYRHFNCAYFYHNEKEVGAGIRYKIKEGAVRREDLFIASKLWCTCHKKSLVKTACRRSLKALKLNYLDLYLIHWP-------MGFKPPHPEWIMSCSELSFCLSHPGVHDLPLDESDMVIPGDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPVTNQIECHPYLTQKNL 206          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.210e-33
Identity = 76/193 (39.38%), Postives = 113/193 (58.55%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAA---AIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  IP +G GT   +       + A   AI  G+RH D A +Y  E+E+G  ++   ED  VKRED++ TSKLW+ +H PE V   L++TL+  Q+DY+DLY++H+P+ ++ G + F  +       +  DI  TW+AME   D+G A++IGVSNF+ ++L  +L     +  P  NQVECH    Q K+
Sbjct:   10 LNDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQSKM 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: GR_BACSU (Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.063e-33
Identity = 82/186 (44.09%), Postives = 111/186 (59.68%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPG-VVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLRE 607
            L+ G ++P  GLG ++ + G     +V AAIK GYR ID A IY NE+ +G+ +K    ++ V RE+L+ITSK+WN     E    A +++L  LQ+DYLDLYL+HWP K K                  TW+A+E LY  GK RAIGVSNF    L +LL+ A + P VNQVE HP   Q++LR+
Sbjct:   11 LHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIK----ESGVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK---------------YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRD 177          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1CD_MOUSE (Aldo-keto reductase family 1 member C13 OS=Mus musculus GN=Akr1c13 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.063e-33
Identity = 83/194 (42.78%), Postives = 115/194 (59.28%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPGVVGNAVAAAIKA---GYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN------LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            LN G  IP++G GT++        ++ AA  A   GYRH+D A  Y  E+EIG  ++   +  VVKREDL+IT+KLW     PE V  AL+++L+ LQ+DY+DLY+MH+PV MK G   F P N      LD  D   TW+ +E   D+G  ++IGVSNF+ ++L  +L     +  P  NQVECH    Q+KL
Sbjct:   10 LNDGHLIPALGFGTYKPKEVPKSKSLEAACLALDVGYRHVDTAYAYQVEEEIGQAIQSKIKAGVVKREDLFITTKLWCTCFRPELVKPALEKSLKKLQLDYVDLYIMHYPVPMKSGDNDF-PVNEQGKSLLDTVDFCDTWERLEECKDAGLVKSIGVSNFNHRQLERILNKPGLKYKPVCNQVECHLYLNQRKL 202          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AK1D1_HUMAN (3-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapiens GN=AKR1D1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.519e-33
Identity = 82/195 (42.05%), Postives = 117/195 (60.00%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDP-----GVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGF-KPEN----LDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            L+ G  IP +GLGT+ S+P     G    +V  AI  GYRHID A IY NE E+G  +++   +  V+RED++   KLW   H PE V   L+RTLR LQ+DY+DLY++  P+  K G   + + EN      K ++ +TW+AMEA  D+G  +++GVSNF+ ++L  +L     +  P  NQVECHP + Q KL
Sbjct:   12 LSDGNSIPIIGLGTY-SEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKL 205          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: P100_LEIMA (Probable reductase OS=Leishmania major GN=P100/11E PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 84/185 (45.41%), Postives = 105/185 (56.76%), Query Frame = 2
Query:   53 LNTGAKIPSVGLGTWQSDPG-VVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPENLDKPDIPSTWKAMEALYDSGKARAIGVSNFSTKKLGDLLEVARVPPAVNQVECHPSWQQQKLR 604
            L+ G K+P  GLG WQS  G V  NAV  A+ AGYRHID A IY NE+ +G  L+     + V RED++IT+KLWN     E    A + + + L +DY+DLYL+HWP    +G      E     D   +W+A E LY   K RAIGVSNF    L D+L +  V P VNQVE HP   Q  LR
Sbjct:   11 LSNGVKMPQFGLGVWQSPAGEVTENAVNWALCAGYRHIDTAAIYKNEESVGAGLRA----SGVPREDVFITTKLWNTEQGYESTLAAFEESRQKLGVDYIDLYLIHWP----RGKDILSKEGKKYLD---SWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQADLR 184          
BLAST of CX294559 vs. ExPASy Swiss-Prot
Match: AKCL2_HUMAN (1,5-anhydro-D-fructose reductase OS=Homo sapiens GN=AKR1E2 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 4.597e-33
Identity = 84/210 (40.00%), Postives = 117/210 (55.71%), Query Frame = 2
Query:   71 IPSVGLGTWQSDPGVVGNAVAAAIKAGYRHIDCAQIYGNEKEIGLVLKKFFEDAVVKREDLWITSKLWNAYHEPEDVPEALDRTLRDLQIDYLDLYLMHWPVKMKKGSVGFKPEN-----------------------LDKPD--IPS------TWKAMEALYDSGKARAIGVSNFSTKKLGDLLEV--ARVPPAVNQVECHPSWQQQKL 601
            IP+VGL +W++ PG V  AV  AI AGYRH DCA  Y NE+E+G  ++   ++  V+REDL+I +KLW   H+   V  A  ++L+ L+++YLDLYL+HWP       +GFKP +                       LD+ +  IPS      TW+AME L  +G  + IGVSNF+ ++L  LL     R  P  NQ+ECHP   Q+ L
Sbjct:    4 IPAVGLSSWKASPGKVTEAVKEAIDAGYRHFDCAYFYHNEREVGAGIRCKIKEGAVRREDLFIATKLWCTCHKKSLVETACRKSLKALKLNYLDLYLIHWP-------MGFKPPHPEWIMSCSELSFCLSHPRVQDLPLDESNMVIPSDTDFLDTWEAMEDLVITGLVKNIGVSNFNHEQLERLLNKPGLRFKPLTNQIECHPYLTQKNL 206          
The following BLAST results are available for this feature:
BLAST of CX294559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
AK1D1_MOUSE2.437e-3441.453-oxo-5-beta-steroid 4-dehydrogenase OS=Mus muscul... [more]
Y2408_MYCS23.183e-3444.86Uncharacterized oxidoreductase MSMEG_2408 OS=Mycob... [more]
XYL1_ASPNG5.430e-3441.03NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
AKCL2_MACFA9.262e-3440.951,5-anhydro-D-fructose reductase OS=Macaca fascicu... [more]
DIDH_RAT1.210e-3339.383-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
GR_BACSU2.063e-3344.09Glyoxal reductase OS=Bacillus subtilis GN=yvgN PE=... [more]
AK1CD_MOUSE2.063e-3342.78Aldo-keto reductase family 1 member C13 OS=Mus mus... [more]
AK1D1_HUMAN3.519e-3342.053-oxo-5-beta-steroid 4-dehydrogenase OS=Homo sapie... [more]
P100_LEIMA4.597e-3345.41Probable reductase OS=Leishmania major GN=P100/11E... [more]
AKCL2_HUMAN4.597e-3340.001,5-anhydro-D-fructose reductase OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionC05054C01SK FlavRip1 Citrus clementina cDNA clone C05054C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX294559 ID=CX294559; Name=CX294559; organism=Citrus clementina; type=EST; length=608bp
TCTCTCTAACGCTTAGCTTTCGAAAATGGCAAATGAGATTCGACACTTCG
TGCTGAACACCGGAGCCAAAATCCCGTCCGTTGGATTAGGCACGTGGCAG
TCTGATCCTGGTGTCGTCGGCAACGCCGTTGCTGCCGCCATCAAGGCTGG
ATACCGACATATTGATTGTGCTCAAATTTACGGCAATGAAAAGGAGATTG
GTTTGGTGCTGAAGAAGTTTTTTGAAGATGCTGTTGTCAAGCGTGAGGAT
TTGTGGATTACCTCTAAACTCTGGAATGCTTATCATGAACCAGAAGATGT
ACCAGAGGCATTGGACAGAACTTTGCGGGACTTACAGATTGACTACCTTG
ATCTATACCTTATGCACTGGCCAGTTAAGATGAAGAAGGGGTCTGTTGGC
TTCAAGCCAGAAAACCTTGATAAACCAGATATACCTAGCACGTGGAAAGC
AATGGAGGCACTTTATGACTCTGGCAAGGCTCGAGCGATCGGAGTAAGCA
ATTTTTCTACAAAGAAGCTTGGAGATTTGTTGGAAGTGGCACGTGTGCCT
CCTGCTGTTAACCAAGTGGAATGCCATCCTTCATGGCAGCAGCAAAAGCT
TCGTGAAT
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